ENSDARG00000089138


Danio rerio

Features
Gene ID: ENSDARG00000089138
  
Biological name :si:ch1073-440b2.1
  
Synonyms : si:ch1073-440b2.1
  
Possible biological names infered from orthology : LON peptidase N-terminal domain and ring finger 2 / LONRF2 / Q1L5Z9
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 28391631
Gene end: 28473487
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000123393
Ensembl peptide - ENSDARP00000152833
swissprot - E7EYP4
ZFIN ID - ZDB-GENE-030131-8303
Ensembl - ENSDARG00000089138
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LONRF2ENSGALG00000016768Gallus gallus
 LONRF2ENSG00000170500Homo sapiens
 Lonrf2ENSMUSG00000048814Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lonrf1l / LON peptidase N-terminal domain and ring finger 1, like / LONRF1* / Q17RB8* / LON peptidase N-terminal domain and ring finger 1*ENSDARG0000007856746
lonrf1 / LON peptidase N-terminal domain and ring finger 1ENSDARG0000007504841


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR003111  Lon, substrate-binding domain
 IPR007110  Immunoglobulin-like domain
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR015947  PUA-like superfamily
 IPR017907  Zinc finger, RING-type, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IBA
 biological_processGO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process IBA
 cellular_componentGO:0005622 intracellular IBA
 molecular_functionGO:0031624 ubiquitin conjugating enzyme binding IBA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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