ENSDARG00000075252


Danio rerio

Features
Gene ID: ENSDARG00000075252
  
Biological name :phrf1
  
Synonyms : PHD and ring finger domains 1 / phrf1
  
Possible biological names infered from orthology : A6H619 / PHD and RING finger domain-containing protein 1 / Q9P1Y6
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 25508495
Gene end: 25546368
  
Corresponding Affymetrix probe sets: Dr.16698.1.A1_at (Zebrafish Array)   Dr.17406.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000125217
Ensembl peptide - ENSDARP00000148082
NCBI entrez gene - 321905     See in Manteia.
RefSeq - XM_005163099
RefSeq - XM_002666868
swissprot - H0WEE0
ZFIN ID - ZDB-GENE-030131-624
Ensembl - ENSDARG00000075252
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PHRF1ENSGALG00000006873Gallus gallus
 PHRF1ENSG00000070047Homo sapiens
 Phrf1ENSMUSG00000038611Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
scaf11 / SR-related CTD-associated factor 11 / Q99590*ENSDARG0000004588510
scaf1 / SR-related CTD-associated factor 1 / Q5U4C3* / Q9H7N4* / Splicing factor, arginine/serine-rich 19 *ENSDARG000000540109


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR001965  Zinc finger, PHD-type
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site
 IPR019786  Zinc finger, PHD-type, conserved site
 IPR019787  Zinc finger, PHD-finger


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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