ENSDARG00000054010


Danio rerio

Features
Gene ID: ENSDARG00000054010
  
Biological name :scaf1
  
Synonyms : scaf1 / SR-related CTD-associated factor 1
  
Possible biological names infered from orthology : Q5U4C3 / Q9H7N4 / Splicing factor, arginine/serine-rich 19
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 32477782
Gene end: 32490621
  
Corresponding Affymetrix probe sets: Dr.19086.1.S1_at (Zebrafish Array)   Dr.7716.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000126216
NCBI entrez gene - 553490     See in Manteia.
RefSeq - XM_005164069
swissprot - I3ITF2
ZFIN ID - ZDB-GENE-120215-214
Ensembl - ENSDARG00000054010
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SCAF1ENSG00000126461Homo sapiens
 Scaf1ENSMUSG00000038406Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
phrf1 / PHD and ring finger domains 1 / A6H619* / Q9P1Y6* / PHD and RING finger domain-containing protein 1 *ENSDARG0000007525210
scaf11 / SR-related CTD-associated factor 11 / Q99590*ENSDARG000000458859


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match