ENSDARG00000075606


Danio rerio

Features
Gene ID: ENSDARG00000075606
  
Biological name :RNF5
  
Synonyms : ring finger protein 5 / RNF5
  
Possible biological names infered from orthology : E3 ubiquitin-protein ligase RNF5 / O35445 / Q99942
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 935565
Gene end: 943141
  
Corresponding Affymetrix probe sets: Dr.13010.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000099944
swissprot - F1R8W7
Ensembl - ENSDARG00000075606
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RNF5ENSG00000204308Homo sapiens
 Rnf5ENSMUSG00000015478Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q6PC78 / rnf185 / ring finger protein 185 / Q91YT2* / E3 ubiquitin-protein ligase RNF185 *ENSDARG0000003299756


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR018957  Zinc finger, C3HC4 RING-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030433 ubiquitin-dependent ERAD pathway IEA
 biological_processGO:0071712 ER-associated misfolded protein catabolic process IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0036513 Derlin-1 retrotranslocation complex IBA
 molecular_functionGO:0044390 ubiquitin-like protein conjugating enzyme binding IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
ABC-family proteins mediated transport
ER Quality Control Compartment (ERQC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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