ENSDARG00000075752


Danio rerio

Features
Gene ID: ENSDARG00000075752
  
Biological name :myo18aa
  
Synonyms : myo18aa / myosin XVIIIAa
  
Possible biological names infered from orthology : MYO18A / myosin XVIIIA / Q92614 / Q9JMH9
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 36950773
Gene end: 37075361
  
Corresponding Affymetrix probe sets: Dr.19639.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000097848
Ensembl peptide - ENSDARP00000118849
NCBI entrez gene - 566880     See in Manteia.
RefSeq - XM_690164
swissprot - E7F632
swissprot - A0A0R4J7R2
ZFIN ID - ZDB-GENE-080425-5
Ensembl - ENSDARG00000075752
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MYO18AENSGALG00000003741Gallus gallus
 MYO18AENSG00000196535Homo sapiens
 Myo18aENSMUSG00000000631Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
myo18ab / myosin XVIIIAb / Q9JMH9* / MYO18A* / Q92614* / myosin XVIIIA*ENSDARG0000006186265
myhc4 / myosin heavy chain 4ENSDARG0000003543817
myhz1.1 / myosin, heavy polypeptide 1.1, skeletal muscleENSDARG0000006799017
myhz1.2 / myosin, heavy polypeptide 1.2, skeletal muscleENSDARG0000006799516
myha / myosin, heavy chain aENSDARG0000009593016
zgc:66156ENSDARG000000952176
CABZ01102039.1ENSDARG000000763573
CABZ01079178.1ENSDARG000001113862
CU633479.6ENSDARG000001148181


Protein motifs (from Interpro)
Interpro ID Name
 IPR000048  IQ motif, EF-hand binding site
 IPR001478  PDZ domain
 IPR001609  Myosin head, motor domain
 IPR002928  Myosin tail
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR031244  Unconventional myosin-XVIIIa


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007018 microtubule-based movement IEA
 biological_processGO:0007030 Golgi organization IGI
 biological_processGO:0007160 cell-matrix adhesion IGI
 biological_processGO:0014866 skeletal myofibril assembly IMP
 biological_processGO:0048741 skeletal muscle fiber development IMP
 cellular_componentGO:0016459 myosin complex IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003774 motor activity IEA
 molecular_functionGO:0003777 microtubule motor activity IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008017 microtubule binding IEA
 molecular_functionGO:0051015 actin filament binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000107 eye eye decreased size , abnormal
Show

 ZFA:0000155 somite somite patchy , abnormal
Show

 ZFA:0001056 myotome myotome anatomical boundary spatial pattern , abnormal
Show

 ZFA:0001094 whole organism whole organism anterior-posterior axis shortened , abnormal
whole organism anterior-posterior axis bent , abnormal
Show

 ZFA:0001114 head head decreased size , abnormal
Show

 ZFA:0001115 trunk trunk bent , abnormal
Show

 ZFA:0001462 somite border somite border spatial pattern , abnormal
somite border irregular spatial pattern , abnormal
Show

 ZFA:0009025 myoblast myoblast Golgi apparatus morphology , abnormal
myoblast cell-matrix adhesion arrested , abnormal
myoblast cell-matrix adhesion decreased occurrence , abnormal
Show

 ZFA:0009114 muscle cell muscle cell disorganized , abnormal
muscle cell detached from myotome , abnormal
muscle cell misaligned with somite , abnormal
muscle cell detached from somite border , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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