ENSDARG00000075798


Danio rerio

Features
Gene ID: ENSDARG00000075798
  
Biological name :usp38
  
Synonyms : ubiquitin specific peptidase 38 / usp38
  
Possible biological names infered from orthology : Q8BW70 / Q8NB14
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 35473219
Gene end: 35491005
  
Corresponding Affymetrix probe sets: Dr.15383.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000135358
Ensembl peptide - ENSDARP00000101307
Ensembl peptide - ENSDARP00000150287
NCBI entrez gene - 563778     See in Manteia.
swissprot - A0A0R4IM95
swissprot - F1RBA1
ZFIN ID - ZDB-GENE-101007-2
Ensembl - ENSDARG00000075798
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 USP38ENSGALG00000009886Gallus gallus
 USP38ENSG00000170185Homo sapiens
 Usp38ENSMUSG00000038250Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
usp46 / A5WWB0 / ubiquitin specific peptidase 46 / P62068* / P62069*ENSDARG0000004534311
usp12b / ubiquitin specific peptidase 12bENSDARG0000007436711
A4FUN7 / usp12a / ubiquitin specific peptidase 12a / USP12* / Q9D9M2* / O75317* / ubiquitin specific peptidase 12*ENSDARG0000007810911


Protein motifs (from Interpro)
Interpro ID Name
 IPR001394  Peptidase C19, ubiquitin carboxyl-terminal hydrolase
 IPR016024  Armadillo-type fold
 IPR018200  Ubiquitin specific protease, conserved site
 IPR028889  Ubiquitin specific protease domain
 IPR033840  Ubiquitin-specific peptidase 38


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0016579 protein deubiquitination IEA
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr