ENSGALG00000009886


Gallus gallus

Features
Gene ID: ENSGALG00000009886
  
Biological name :USP38
  
Synonyms : ubiquitin specific peptidase 38 / USP38
  
Possible biological names infered from orthology : Q8BW70 / Q8NB14
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 30657186
Gene end: 30674581
  
Corresponding Affymetrix probe sets: Gga.13587.1.S1_s_at (Chicken Array)   Gga.9862.1.S1_at (Chicken Array)   GgaAffx.23065.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000048919
Ensembl peptide - ENSGALP00000016052
NCBI entrez gene - 422455     See in Manteia.
RefSeq - XM_420421
RefSeq - XM_015276684
swissprot - F1NHV2
swissprot - A0A1D5P874
Ensembl - ENSGALG00000009886
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 usp38ENSDARG00000075798Danio rerio
 USP38ENSG00000170185Homo sapiens
 Usp38ENSMUSG00000038250Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
USP35 / ubiquitin specific peptidase 35 / Q9P2H5*ENSGALG0000003500745
USP12 / ubiquitin specific peptidase 12 / O75317* / Q9D9M2*ENSGALG0000003470811
USP12-likeENSGALG0000003476911
USP46 / ubiquitin specific peptidase 46 / P62068* / P62069*ENSGALG0000003749611


Protein motifs (from Interpro)
Interpro ID Name
 IPR001394  Peptidase C19, ubiquitin carboxyl-terminal hydrolase
 IPR018200  Ubiquitin specific protease, conserved site
 IPR028889  Ubiquitin specific protease domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0016579 protein deubiquitination IEA
 molecular_functionGO:0004843 thiol-dependent ubiquitin-specific protease activity IEA
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr