ENSDARG00000076679


Danio rerio

Features
Gene ID: ENSDARG00000076679
  
Biological name :rai1
  
Synonyms : rai1 / retinoic acid induced 1
  
Possible biological names infered from orthology : Q61818 / Q7Z5J4
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 62000822
Gene end: 62053314
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000097458
NCBI entrez gene - 101885257     See in Manteia.
swissprot - E7F726
ZFIN ID - ZDB-GENE-101203-2
Ensembl - ENSDARG00000076679
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RAI1ENSGALG00000004888Gallus gallus
 RAI1ENSG00000108557Homo sapiens
 Rai1ENSMUSG00000062115Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tcf20 / transcription factor 20 / Q9UGU0* / Q9EPQ8* / Zfp957* / zinc finger protein 957*ENSDARG0000007834813
si:ch211-165g14.1ENSDARG000000864597
si:dkey-94l16.4ENSDARG000000901427


Protein motifs (from Interpro)
Interpro ID Name
 IPR001965  Zinc finger, PHD-type
 IPR034732  Extended PHD (ePHD) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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