ENSDARG00000077352


Danio rerio

Features
Gene ID: ENSDARG00000077352
  
Biological name :b4galnt1b
  
Synonyms : b4galnt1b / beta-1,4-N-acetyl-galactosaminyl transferase 1b
  
Possible biological names infered from orthology : B4GALNT1 / beta-1,4-N-acetyl-galactosaminyltransferase 1 / Beta-1,4 N-acetylgalactosaminyltransferase 1 / Q00973 / Q09200
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 39222598
Gene end: 39252851
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000128929
Ensembl peptide - ENSDARP00000145190
NCBI entrez gene - 793635     See in Manteia.
RefSeq - XM_005166090
RefSeq - XM_005166089
swissprot - X1WFC5
ZFIN ID - ZDB-GENE-100728-3
Ensembl - ENSDARG00000077352
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q00973ENSG00000135454Homo sapiens
 Q09200ENSMUSG00000006731Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
b4galnt1a / beta-1,4-N-acetyl-galactosaminyl transferase 1a / Q09200* / Q00973* / B4GALNT1* / beta-1,4-N-acetyl-galactosaminyltransferase 1* / Beta-1,4 N-acetylgalactosaminyltransferase 1 *ENSDARG0000006152059
b4galnt2.1 / beta-1,4-N-acetyl-galactosaminyl transferase 2, tandem duplicate 1 / Q8NHY0* / B4GALNT2* / beta-1,4-N-acetyl-galactosaminyltransferase 2*ENSDARG0000009457936
b4galnt2.2 / beta-1,4-N-acetyl-galactosaminyl transferase 2, tandem duplicate 2 / Q8NHY0* / Q09199* / B4GALNT2* / beta-1,4-N-acetyl-galactosaminyltransferase 2* / Beta-1,4 N-acetylgalactosa...ENSDARG0000007060535
CABZ01039859.1 / Q8NHY0* / B4GALNT2* / beta-1,4-N-acetyl-galactosaminyltransferase 2*ENSDARG0000007636133


Protein motifs (from Interpro)
Interpro ID Name
 IPR001173  Glycosyltransferase 2-like
 IPR011143  Ganglioside GM2 synthase
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030259 lipid glycosylation IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030173 integral component of Golgi membrane IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0016758 transferase activity, transferring hexosyl groups IEA


Pathways (from Reactome)
Pathway description
Glycosphingolipid metabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000061520 b4galnt1a / beta-1,4-N-acetyl-galactosaminyl transferase 1a / Q09200* / Q00973* / B4GALNT1* / beta-1,4-N-acetyl-galactosaminyltransferase 1* / Beta-1,4 N-acetylgalactosaminyltransferase 1 *  / complex
 ENSDARG00000077352 b4galnt1b / beta-1,4-N-acetyl-galactosaminyl transferase 1b / Q09200* / Q00973* / B4GALNT1* / beta-1,4-N-acetyl-galactosaminyltransferase 1* / Beta-1,4 N-acetylgalactosaminyltransferase 1 *  / complex






 

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