ENSDARG00000077547


Danio rerio

Features
Gene ID: ENSDARG00000077547
  
Biological name :tmlhe
  
Synonyms : tmlhe / trimethyllysine hydroxylase, epsilon
  
Possible biological names infered from orthology : Q9NVH6
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 43669943
Gene end: 43695816
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000119657
NCBI entrez gene - 555271     See in Manteia.
RefSeq - XM_677739
swissprot - E7F0M9
ZFIN ID - ZDB-GENE-091204-144
Ensembl - ENSDARG00000077547
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TMLHEENSGALG00000007443Gallus gallus
 TMLHEENSG00000185973Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
bbox1 / butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1 / O75936* / Q924Y0* / Gamma-butyrobetaine dioxygenase * / gamma-butyrobetaine hydroxylase 1*ENSDARG0000003613516


Protein motifs (from Interpro)
Interpro ID Name
 IPR003819  TauD/TfdA-like domain
 IPR010376  Gamma-butyrobetaine hydroxylase-like, N-terminal
 IPR012776  Trimethyllysine dioxygenase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0045329 carnitine biosynthetic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 molecular_functionGO:0005506 iron ion binding IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0050353 trimethyllysine dioxygenase activity IEA


Pathways (from Reactome)
Pathway description
Carnitine synthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000077547 tmlhe / trimethyllysine hydroxylase, epsilon / Q9NVH6*  / complex






 

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