ENSDARG00000077776


Danio rerio

Features
Gene ID: ENSDARG00000077776
  
Biological name :csnk2b
  
Synonyms : casein kinase 2, beta polypeptide / csnk2b / Q91398
  
Possible biological names infered from orthology : casein kinase 2 beta / Casein kinase II subunit beta / P67870 / P67871
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 26730298
Gene end: 26736346
  
Corresponding Affymetrix probe sets: Dr.12506.1.S1_at (Zebrafish Array)   NM_131187_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000098474
Ensembl peptide - ENSDARP00000146410
NCBI entrez gene - 30428     See in Manteia.
RefSeq - XM_005169999
RefSeq - NM_131187
RefSeq Peptide - NP_571262
swissprot - Q91398
swissprot - Q1LXD2
ZFIN ID - ZDB-GENE-990415-29
Ensembl - ENSDARG00000077776
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CSNK2BENSG00000204435Homo sapiens
 Csnk2bENSMUSG00000024387Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000704  Casein kinase II, regulatory subunit
 IPR016149  Casein kinase II, regulatory subunit, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016055 Wnt signaling pathway IEA
 biological_processGO:0016310 phosphorylation IEA
 biological_processGO:0045859 regulation of protein kinase activity IEA
 cellular_componentGO:0005956 protein kinase CK2 complex IEA
 cellular_componentGO:0031519 PcG protein complex ISS
 molecular_functionGO:0016301 kinase activity IEA
 molecular_functionGO:0019887 protein kinase regulator activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Neutrophil degranulation
Regulation of TP53 Activity through Phosphorylation
RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000035559 tp53 / P79734 / tumor protein p53 / Trp53* / P04637* / P02340* / transformation related protein 53*  / reaction
 ENSDARG00000013582 csnk2a2b / casein kinase 2, alpha prime polypeptide b / P19784* / O54833* / CSNK2A2* / casein kinase 2 alpha 2* / Casein kinase II subunit alpha *  / complex
 ENSDARG00000077776 Q91398 / csnk2b / casein kinase 2, beta polypeptide / P67870* / P67871* / casein kinase 2 beta* / Casein kinase II subunit beta *  / complex
 ENSDARG00000079949 supt16h / SPT16 homolog, facilitates chromatin remodeling subunit / Q9Y5B9* / Supt16* / suppressor of Ty 16*  / complex






 

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