ENSDARG00000077785


Danio rerio

Features
Gene ID: ENSDARG00000077785
  
Biological name :atf5b
  
Synonyms : activating transcription factor 5b / atf5b
  
Possible biological names infered from orthology : activating transcription factor 5 / ATF5 / Cyclic AMP-dependent transcription factor ATF-5 / O70191 / Q9Y2D1
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 17862207
Gene end: 17870090
  
Corresponding Affymetrix probe sets: Dr.9110.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000127988
Ensembl peptide - ENSDARP00000136339
Ensembl peptide - ENSDARP00000098375
NCBI entrez gene - 567253     See in Manteia.
RefSeq - XM_690545
swissprot - A0A0R4IPC0
swissprot - F1QGR6
ZFIN ID - ZDB-GENE-030131-2637
Ensembl - ENSDARG00000077785
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ATF5ENSG00000169136Homo sapiens
 Atf5ENSMUSG00000038539Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
atf5a / activating transcription factor 5a / ATF5* / O70191* / Q9Y2D1* / activating transcription factor 5* / Cyclic AMP-dependent transcription factor ATF-5 *ENSDARG0000006809621
atf4b / activating transcription factor 4b / ATF4* / P18848* / Q06507* / activating transcription factor 4* / Cyclic AMP-dependent transcription factor ATF-4 *ENSDARG0000003814116
atf4a / Q6NW59 / activating transcription factor 4a / ATF4* / Q06507* / P18848* / activating transcription factor 4* / Cyclic AMP-dependent transcription factor ATF-4 *ENSDARG0000011193913


Protein motifs (from Interpro)
Interpro ID Name
 IPR004827  Basic-leucine zipper domain
 IPR029855  cAMP-dependent transcription factor ATF-5


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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