ENSDARG00000078752


Danio rerio

Features
Gene ID: ENSDARG00000078752
  
Biological name :rubcn
  
Synonyms : rubcn / RUN domain and cysteine-rich domain containing, Beclin 1-interacting protein
  
Possible biological names infered from orthology : Q80U62 / Q92622 / RUN and cysteine rich domain containing beclin 1 interacting protein / Run domain Beclin-1-interacting and cysteine-rich domain-containing protein
  
Species: Danio rerio
  
Chr. number: 22
Strand: 1
Band:
Gene start: 35275206
Gene end: 35312649
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000149590
Ensembl peptide - ENSDARP00000152937
Ensembl peptide - ENSDARP00000101878
Ensembl peptide - ENSDARP00000137353
Ensembl peptide - ENSDARP00000146494
NCBI entrez gene - 100000896     See in Manteia.
swissprot - A0A0N5E8A0
swissprot - F1Q4W5
ZFIN ID - ZDB-GENE-100922-142
Ensembl - ENSDARG00000078752
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RUBCNENSGALG00000007557Gallus gallus
 RUBCNENSG00000145016Homo sapiens
 RubcnENSMUSG00000035629Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
plekhm1 / pleckstrin homology domain containing, family M (with RUN domain) member 1 / Q7TSI1* / Q9Y4G2* / pleckstrin homology and RUN domain containing M1* / Pleckstrin homology domain-con...ENSDARG0000009995416
rubcnl / RUN and cysteine rich domain containing beclin 1 interacting protein like / Q9H714*ENSDARG0000008840213
plekhm3 / pleckstrin homology domain containing, family M, member 3 / Q6ZWE6* / pleckstrin homology domain containing M3*ENSDARG0000003063311
def8 / differentially expressed in FDCP 8 homolog (mouse) / Q6ZN54* / Q99J78* / Differentially expressed in FDCP 8 * / differentially expressed in FDCP 8 homolog*ENSDARG000000682089
CU570893.1ENSDARG000001147155


Protein motifs (from Interpro)
Interpro ID Name
 IPR004012  RUN domain
 IPR025258  Putative zinc-RING and/or ribbon


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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