ENSDARG00000086126


Danio rerio
zinctrim33lfingerphd-typering-typefyveconservedsiteionbindingb-box-typeringphd-fingerintracellularmetal

Features
Gene ID: ENSDARG00000086126
  
Biological name :trim33l
  
Synonyms : trim33l / tripartite motif containing 33, like
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 28764017
Gene end: 28790417
  
Corresponding Affymetrix probe sets: Dr.7701.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000106248
NCBI entrez gene - 327484     See in Manteia.
RefSeq - XM_005158077
swissprot - E7FDQ1
ZFIN ID - ZDB-GENE-030131-5695
Ensembl - ENSDARG00000086126
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
trim33 / tripartite motif containing 33 / Q9UPN9*ENSDARG0000001618116
trim24 / tripartite motif containing 24ENSDARG0000010335014
trim66 / tripartite motif containing 66 / O15016* / Q924W6*ENSDARG0000005433211
trim71 / E7FAM5 / tripartite motif containing 71, E3 ubiquitin protein ligase / Q2Q1W2* / Q1PSW8* / tripartite motif containing 71*ENSDARG000000755938
trim3b / tripartite motif containing 3b / TRIM3* / Q9R1R2* / O75382* / tripartite motif containing 3*ENSDARG000000053977
trim2a / tripartite motif containing 2a / TRIM2* / Q9ESN6* / Q9C040* / tripartite motif containing 2*ENSDARG000000318177
trim3a / tripartite motif containing 3a / TRIM3* / Q9R1R2* / O75382* / tripartite motif containing 3*ENSDARG000000637117
trim2b / tripartite motif containing 2b / TRIM2* / Q9ESN6* / Q9C040* / tripartite motif containing 2*ENSDARG000000761746
trim45 / tripartite motif containing 45 / Q6PFY8* / Q9H8W5* / Tripartite motif-containing protein 45 *ENSDARG000000767816


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR001965  Zinc finger, PHD-type
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site
 IPR019786  Zinc finger, PHD-type, conserved site
 IPR019787  Zinc finger, PHD-finger


Gene Ontology (GO)
ion bindingion bindingion bindingion bindingion bindingion bindingion bindingion bindingion bindingion bindingion bindingion binding
cellcellcellcellcellcellcellcellcellcellcellcell
TypeGO IDTermEv.Code
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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