ENSDARG00000087438


Danio rerio

Features
Gene ID: ENSDARG00000087438
  
Biological name :spi2
  
Synonyms : spi2 / Spi-2 proto-oncogene
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 17801328
Gene end: 17805128
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000108883
Ensembl peptide - ENSDARP00000149679
swissprot - E7FG96
ZFIN ID - ZDB-GENE-131121-377
Ensembl - ENSDARG00000087438
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
spic / Spi-C transcription factor (Spi-1/PU.1 related) / Q8N5J4* / Q6P3D7* / Spi-C transcription factor* / Transcription factor Spi-C *ENSDARG0000001243532
spi1b / Spi-1 proto-oncogene b / SPI1* / P17947* / P17433* / Spi-1 proto-oncogene* / spleen focus forming virus (SFFV) proviral integration oncogene*ENSDARG0000000076731
spi1a / Spi-1 proto-oncogene a / SPI1* / P17947* / P17433* / Spi-1 proto-oncogene* / spleen focus forming virus (SFFV) proviral integration oncogene*ENSDARG0000006779731


Protein motifs (from Interpro)
Interpro ID Name
 IPR000418  Ets domain
 IPR011991  ArsR-like helix-turn-helix domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0030154 cell differentiation IBA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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