ENSDARG00000067797


Danio rerio

Features
Gene ID: ENSDARG00000067797
  
Biological name :spi1a
  
Synonyms : spi1a / Spi-1 proto-oncogene a
  
Possible biological names infered from orthology : P17433 / P17947 / SPI1 / Spi-1 proto-oncogene / spleen focus forming virus (SFFV) proviral integration oncogene
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 35553542
Gene end: 35572245
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000098095
NCBI entrez gene - 751704     See in Manteia.
RefSeq - XM_005163181
RefSeq - XM_017354096
swissprot - F1QFB6
ZFIN ID - ZDB-GENE-060825-351
Ensembl - ENSDARG00000067797
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SPI1ENSGALG00000008127Gallus gallus
 SPI1ENSG00000066336Homo sapiens
 Spi1ENSMUSG00000002111Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
spi1b / Spi-1 proto-oncogene b / SPI1* / P17947* / P17433* / Spi-1 proto-oncogene* / spleen focus forming virus (SFFV) proviral integration oncogene*ENSDARG0000000076744
spic / Spi-C transcription factor (Spi-1/PU.1 related) / Q8N5J4* / Q6P3D7* / Spi-C transcription factor* / Transcription factor Spi-C *ENSDARG0000001243525
spi2 / Spi-2 proto-oncogeneENSDARG0000008743823


Protein motifs (from Interpro)
Interpro ID Name
 IPR000418  Ets domain
 IPR011991  ArsR-like helix-turn-helix domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002761 regulation of myeloid leukocyte differentiation IMP
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000084 yolk yolk lacks parts or has fewer parts of type granulocyte , abnormal
yolk lacks parts or has fewer parts of type macrophage , abnormal
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 ZFA:0000094 blood island blood island lacks parts or has fewer parts of type granulocyte , abnormal
blood island lacks parts or has fewer parts of type macrophage , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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