ENSDARG00000087528


Danio rerio

Features
Gene ID: ENSDARG00000087528
  
Biological name :snip1
  
Synonyms : Smad nuclear interacting protein / snip1
  
Possible biological names infered from orthology : Q8BIZ6 / Q8TAD8 / Smad nuclear interacting protein 1
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 33930864
Gene end: 33937924
  
Corresponding Affymetrix probe sets: Dr.17397.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000130301
Ensembl peptide - ENSDARP00000108908
NCBI entrez gene - 793873     See in Manteia.
RefSeq - NM_001025470
RefSeq Peptide - NP_001020641
swissprot - A0A0R4IBM5
swissprot - Q4V8W8
ZFIN ID - ZDB-GENE-041026-3
Ensembl - ENSDARG00000087528
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SNIP1ENSGALG00000002010Gallus gallus
 SNIP1ENSG00000163877Homo sapiens
 Snip1ENSMUSG00000050213Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc4a1ap / solute carrier family 4 (anion exchanger), member 1, adaptor protein / Q9BWU0* / solute carrier family 4 member 1 adaptor protein*ENSDARG0000003416013
ppp1r8b / protein phosphatase 1, regulatory subunit 8b / Q8R3G1* / PPP1R8* / Q12972* / protein phosphatase 1 regulatory subunit 8* / Nuclear inhibitor of protein phosphatase 1 *ENSDARG0000002243011
ppp1r8a / protein phosphatase 1, regulatory subunit 8a / Q8R3G1* / PPP1R8* / Q12972* / protein phosphatase 1 regulatory subunit 8* / Nuclear inhibitor of protein phosphatase 1 *ENSDARG0000000718610


Protein motifs (from Interpro)
Interpro ID Name
 IPR000253  Forkhead-associated (FHA) domain
 IPR008984  SMAD/FHA domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr