ENSGALG00000002010


Gallus gallus
fhadomainregulationSNIP1forkhead-associatedsmadsuperfamilytranscriptiondna-templatedi-kappabkinasenf-kappabsignalingproductionmirnasinvolvedgenesilencingmirnaproteintargetingmitochondrionnucleusnucleoplasmcytosolmrnabinding

Features
Gene ID: ENSGALG00000002010
  
Biological name :SNIP1
  
Synonyms : Smad nuclear interacting protein 1 / SNIP1
  
Possible biological names infered from orthology : Q8BIZ6 / Q8TAD8
  
Species: Gallus gallus
  
Chr. number: 23
Strand: 1
Band:
Gene start: 3766307
Gene end: 3768740
  
Corresponding Affymetrix probe sets: Gga.13133.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000003126
Ensembl peptide - ENSGALP00000056839
NCBI entrez gene - 419616     See in Manteia.
RefSeq - XM_015297786
swissprot - A0A1D5PV78
swissprot - F1P3G6
Ensembl - ENSGALG00000002010
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snip1ENSDARG00000087528Danio rerio
 SNIP1ENSG00000163877Homo sapiens
 Snip1ENSMUSG00000050213Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SLC4A1AP / solute carrier family 4 member 1 adaptor protein / Q9BWU0* / solute carrier family 4 (anion exchanger), member 1, adaptor protein*ENSGALG0000001004713
PPP1R8 / protein phosphatase 1 regulatory subunit 8 / Q12972* / Q8R3G1* / Nuclear inhibitor of protein phosphatase 1 *ENSGALG000000007298


Protein motifs (from Interpro)
Interpro ID Name
 IPR000253  Forkhead-associated (FHA) domain
 IPR008984  SMAD/FHA domain superfamily


Gene Ontology (GO)
nitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcell communicationcellular response to stimulusresponse to chemicalcellular component organizationmacromolecule localizationestablishment of localizationcellular localizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcell communicationcellular response to stimulusresponse to chemicalcellular component organizationmacromolecule localizationestablishment of localizationcellular localizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcell communicationcellular response to stimulusresponse to chemicalcellular component organizationmacromolecule localizationestablishment of localizationcellular localizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcell communicationcellular response to stimulusresponse to chemicalcellular component organizationmacromolecule localizationestablishment of localizationcellular localizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcell communicationcellular response to stimulusresponse to chemicalcellular component organizationmacromolecule localizationestablishment of localizationcellular localizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcell communicationcellular response to stimulusresponse to chemicalcellular component organizationmacromolecule localizationestablishment of localizationcellular localizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcell communicationcellular response to stimulusresponse to chemicalcellular component organizationmacromolecule localizationestablishment of localizationcellular localizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcell communicationcellular response to stimulusresponse to chemicalcellular component organizationmacromolecule localizationestablishment of localizationcellular localizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcell communicationcellular response to stimulusresponse to chemicalcellular component organizationmacromolecule localizationestablishment of localizationcellular localizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcell communicationcellular response to stimulusresponse to chemicalcellular component organizationmacromolecule localizationestablishment of localizationcellular localizationnitrogen conitrogen compound metabolic processbiosynthetibiosynthetic processcellular mecellular metabolic processprimary metprimary metabolic processorganic suborganic substance metabolic processcell communcell communicationcellular recellular response to stimulusresponse toresponse to chemicalcellular cocellular component organizationmacromolecumacromolecule localizationestablishmeestablishment of localizationcellular locellular localization
organic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingheterocyclic compound binding
cellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellcellorganelleorganellemembrane-enclosed lumenmembrane-enclosed lumen
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007249 I-kappaB kinase/NF-kappaB signaling IEA
 biological_processGO:0035196 production of miRNAs involved in gene silencing by miRNA IEA
 biological_processGO:1903955 positive regulation of protein targeting to mitochondrion IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0003729 mRNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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