ENSDARG00000087529


Danio rerio

Features
Gene ID: ENSDARG00000087529
  
Biological name :zgc:85936
  
Synonyms : zgc:85936
  
Possible biological names infered from orthology : A8VU90 / ANKLE1 / ankyrin repeat and LEM domain containing 1 / Ankyrin repeat and LEM domain-containing protein 1 / Q8NAG6
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 48060464
Gene end: 48069778
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000105049
NCBI entrez gene - 406563     See in Manteia.
RefSeq - NM_214744
RefSeq Peptide - NP_999909
swissprot - F1QR97
ZFIN ID - ZDB-GENE-040426-2450
Ensembl - ENSDARG00000087529
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ANKLE1ENSG00000160117Homo sapiens
 A8VU90ENSMUSG00000046295Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002110  Ankyrin repeat
 IPR003887  LEM domain
 IPR011015  LEM/LEM-like domain superfamily
 IPR020683  Ankyrin repeat-containing domain
 IPR034998  Ankyrin repeat and LEM domain-containing protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006998 nuclear envelope organization IBA
 biological_processGO:0070197 meiotic attachment of telomere to nuclear envelope IBA
 biological_processGO:0090305 nucleic acid phosphodiester bond hydrolysis IEA
 cellular_componentGO:0005639 integral component of nuclear inner membrane IBA
 molecular_functionGO:0004519 endonuclease activity IEA
 molecular_functionGO:0031490 chromatin DNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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