ENSDARG00000087782


Danio rerio

Features
Gene ID: ENSDARG00000087782
  
Biological name :rnf152
  
Synonyms : ring finger protein 152 / rnf152
  
Possible biological names infered from orthology : E3 ubiquitin-protein ligase RNF152 / Q8BG47 / Q8N8N0
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 27867830
Gene end: 27871054
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000106876
swissprot - F1Q9Q8
ZFIN ID - ZDB-GENE-050327-84
Ensembl - ENSDARG00000087782
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 E1C2W7ENSGALG00000028822Gallus gallus
 Q8N8N0ENSG00000176641Homo sapiens
 Q8BG47ENSMUSG00000047496Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR018957  Zinc finger, C3HC4 RING-type
 IPR033609  E3 ubiquitin-protein ligase RNF152


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IEA
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0010508 positive regulation of autophagy IEA
 biological_processGO:1904262 negative regulation of TORC1 signaling IEA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IEA


Pathways (from Reactome)
Pathway description
E3 ubiquitin ligases ubiquitinate target proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000029 hindbrain hindbrain decreased amount , abnormal
Show

 ZFA:0000042 midbrain hindbrain boundary midbrain hindbrain boundary decreased amount , abnormal
Show

 ZFA:0000107 eye eye decreased size , abnormal
eye decreased diameter , abnormal
eye decreased amount , abnormal
Show

 ZFA:0000109 forebrain forebrain decreased amount , abnormal
Show

 ZFA:0000128 midbrain midbrain decreased amount , abnormal
Show

 ZFA:0001064 rhombomere rhombomere decreased size , abnormal
Show

 ZFA:0001135 neural tube neural tube decreased width , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr