ENSGALG00000028822


Gallus gallus

Features
Gene ID: ENSGALG00000028822
  
Biological name :RNF152
  
Synonyms : E1C2W7 / E3 ubiquitin-protein ligase RNF152 / RNF152
  
Possible biological names infered from orthology : Q8BG47 / Q8N8N0 / ring finger protein 152
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 68770273
Gene end: 68772408
  
Corresponding Affymetrix probe sets: Gga.16814.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000042495
NCBI entrez gene - 420909     See in Manteia.
RefSeq - XM_015282181
RefSeq - NM_001305034
RefSeq - XM_015282178
RefSeq - XM_015282180
RefSeq Peptide - NP_001291963
swissprot - E1C2W7
Ensembl - ENSGALG00000028822
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rnf152ENSDARG00000087782Danio rerio
 Q8N8N0ENSG00000176641Homo sapiens
 Q8BG47ENSMUSG00000047496Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR033609  E3 ubiquitin-protein ligase RNF152


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IEA
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0010508 positive regulation of autophagy IBA
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0034198 cellular response to amino acid starvation IEA
 biological_processGO:0070534 protein K63-linked ubiquitination IEA
 biological_processGO:0070936 protein K48-linked ubiquitination IEA
 biological_processGO:1904262 negative regulation of TORC1 signaling IEA
 cellular_componentGO:0005764 lysosome ISS
 cellular_componentGO:0005765 lysosomal membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031301 integral component of organelle membrane IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0031267 small GTPase binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
E3 ubiquitin ligases ubiquitinate target proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000037716 UBA52 / ubiquitin A-52 residue ribosomal protein fusion product 1 / P62984* / P62987* / Gm5239* / Gm11808* / predicted gene 11808*  / complex / reaction
 ENSGALG00000036790 P79781 / RPS27A / Ubiquitin-40S ribosomal protein S27a Ubiquitin 40S ribosomal protein S27a / P62983* / P62979* / AL136454.1* / ribosomal protein S27a*  / complex / reaction
 ENSGALG00000041226 RRAGB* / RRAGA* / Q7L523* / Q80X95* / Q5VZM2* / Q6NTA4* / Ras related GTP binding A* / Ras related GTP binding B* / Ras-related GTP-binding protein A * / Ras-related GTP-binding protein B *  / complex / reaction






 

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