ENSDARG00000088157


Danio rerio

Features
Gene ID: ENSDARG00000088157
  
Biological name :smoc2
  
Synonyms : smoc2 / SPARC related modular calcium binding 2
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 43247936
Gene end: 43325839
  
Corresponding Affymetrix probe sets: Dr.3588.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000108925
Ensembl peptide - ENSDARP00000133073
swissprot - A0A0R4IDK4
swissprot - E7FET3
ZFIN ID - ZDB-GENE-021031-5
Ensembl - ENSDARG00000088157
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
smoc1 / SPARC related modular calcium binding 1 / Q9H4F8*ENSDARG0000008825547


Protein motifs (from Interpro)
Interpro ID Name
 IPR000716  Thyroglobulin type-1
 IPR002350  Kazal domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site
 IPR019577  SPARC/Testican, calcium-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0030510 regulation of BMP signaling pathway IMP
 biological_processGO:0042476 odontogenesis IMP
 biological_processGO:0048703 embryonic viscerocranium morphogenesis IMP
 biological_processGO:0061515 myeloid cell development IMP
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000107 eye eye absent , abnormal
Show

 ZFA:0000694 ceratobranchial 5 tooth ceratobranchial 5 tooth absent , abnormal
ceratobranchial 5 tooth decreased size , abnormal
Show

 ZFA:0001114 head head decreased size , abnormal
head hypoplastic , abnormal
Show

 ZFA:0001400 ceratohyal cartilage ceratohyal cartilage inverted , abnormal
ceratohyal cartilage flattened , abnormal
Show

 ZFA:0001458 cranial cartilage cranial cartilage morphology , abnormal
cranial cartilage absent , abnormal
Show

 ZFA:0001516 ceratobranchial cartilage ceratobranchial cartilage decreased size , abnormal
ceratobranchial cartilage decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr