ENSDARG00000089156


Danio rerio

Features
Gene ID: ENSDARG00000089156
  
Biological name :egr3
  
Synonyms : early growth response 3 / egr3
  
Possible biological names infered from orthology : Mus musculus early growth response 3 (Egr3), transcript variant 3, mRNA. / P43300 / Q06889
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 50727220
Gene end: 50733508
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000109921
NCBI entrez gene - 436920     See in Manteia.
RefSeq - NM_001002647
RefSeq Peptide - NP_001002647
swissprot - F1QCH3
ZFIN ID - ZDB-GENE-040718-394
Ensembl - ENSDARG00000089156
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 EGR3ENSG00000179388Homo sapiens
 Egr3ENSMUSG00000033730Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
egr2b / early growth response 2b / EGR2* / P11161* / P08152* / early growth response 2* / E3 SUMO-protein ligase EGR2 *ENSDARG0000004282644
egr1 / P26632 / early growth response 1 / P08046* / P18146* / Early growth response protein 1 *ENSDARG0000003742138
egr2a / early growth response 2a / EGR2* / P11161* / P08152* / early growth response 2* / E3 SUMO-protein ligase EGR2 *ENSDARG0000004409838
egr4 / early growth response 4 / Q05215* / Q9WUF2* / Early growth response protein 4 *ENSDARG0000007779924
wt1a / wilms tumor 1a / WT1* / P19544* / Wilms tumor 1* / Wilms tumor 1 homolog*ENSDARG0000003142022
wt1b / wilms tumor 1b / WT1* / P19544* / Wilms tumor 1* / Wilms tumor 1 homolog*ENSDARG0000000799020


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR021849  Early growth response protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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