ENSDARG00000089463


Danio rerio

Features
Gene ID: ENSDARG00000089463
  
Biological name :dhx58
  
Synonyms : DEXH (Asp-Glu-X-His) box polypeptide 58 / dhx58
  
Possible biological names infered from orthology : DExH-box helicase 58 / Probable ATP-dependent RNA helicase DHX58 / Q96C10 / Q99J87
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 17689419
Gene end: 17710221
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000110039
Ensembl peptide - ENSDARP00000147351
NCBI entrez gene - 100148871     See in Manteia.
RefSeq - NM_001257157
RefSeq Peptide - NP_001244086
swissprot - F1QUY3
ZFIN ID - ZDB-GENE-120612-3
Ensembl - ENSDARG00000089463
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DHX58ENSGALG00000023821Gallus gallus
 DHX58ENSG00000108771Homo sapiens
 Dhx58ENSMUSG00000017830Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ifih1 / interferon induced with helicase C domain 1 / Q8R5F7* / Q9BYX4* / Interferon-induced helicase C domain-containing protein 1 *ENSDARG0000001855342
dicer1 / Q6TV19 / dicer 1, ribonuclease type III / Q9UPY3* / dicer 1, ribonuclease III*ENSDARG0000000112922
CABZ01079748.1 / FANCM* / Q8IYD8* / Fanconi anemia complementation group M*ENSDARG000001121368
fancm / Fanconi anemia, complementation group M / Q8IYD8*ENSDARG000001039331


Protein motifs (from Interpro)
Interpro ID Name
 IPR001650  Helicase, C-terminal
 IPR006935  Helicase/UvrB, N-terminal
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR021673  RIG-I-like receptor, C-terminal regulatory domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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