ENSDARG00000089873


Danio rerio

Features
Gene ID: ENSDARG00000089873
  
Biological name :socs1b
  
Synonyms : socs1b / suppressor of cytokine signaling 1b
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 8962624
Gene end: 8966046
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000149562
Ensembl peptide - ENSDARP00000122638
NCBI entrez gene - 100007521     See in Manteia.
RefSeq - NM_001252630
RefSeq Peptide - NP_001239559
swissprot - E7FDH8
ZFIN ID - ZDB-GENE-090313-141
Ensembl - ENSDARG00000089873
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
socs1a / suppressor of cytokine signaling 1a / SOCS1* / O35716* / O15524* / suppressor of cytokine signaling 1*ENSDARG0000003809541
socs3a / suppressor of cytokine signaling 3a / SOCS3* / O14543* / suppressor of cytokine signaling 3*ENSDARG0000002542831
socs3b / suppressor of cytokine signaling 3b / SOCS3* / O35718* / O14543* / suppressor of cytokine signaling 3*ENSDARG0000002661127
cishb / cytokine inducible SH2-containing protein b / CISH* / Q62225* / Q9NSE2* / cytokine inducible SH2 containing protein*ENSDARG0000001677326
socs6a / suppressor of cytokine signaling 6a / SOCS6* / O14544* / suppressor of cytokine signaling 6*ENSDARG0000005856526
socs5b / suppressor of cytokine signaling 5b / SOCS5* / O75159* / O54928* / suppressor of cytokine signaling 5*ENSDARG0000006274526
socs5a / suppressor of cytokine signaling 5a / SOCS5* / O75159* / O54928* / suppressor of cytokine signaling 5*ENSDARG0000010071726
socs9 / suppressor of cytokine signaling 9ENSDARG0000010198526
socs4 / suppressor of cytokine signaling 4ENSDARG0000007850925
socs6b / suppressor of cytokine signaling 6bENSDARG0000001586324
cish / cytokine inducible SH2-containing protein / Q62225* / Q9NSE2*ENSDARG0000006031624
socs2 / suppressor of cytokine signaling 2 / O14508* / O35717*ENSDARG0000004555723
socs7 / suppressor of cytokine signaling 7 / O14512*ENSDARG0000007701823


Protein motifs (from Interpro)
Interpro ID Name
 IPR000980  SH2 domain
 IPR001496  SOCS box domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006469 negative regulation of protein kinase activity IBA
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0019221 cytokine-mediated signaling pathway IBA
 biological_processGO:0035556 intracellular signal transduction IEA
 biological_processGO:0046426 negative regulation of JAK-STAT cascade IEA
 biological_processGO:0060334 regulation of interferon-gamma-mediated signaling pathway IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0004860 protein kinase inhibitor activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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