ENSDARG00000090696


Danio rerio

Features
Gene ID: ENSDARG00000090696
  
Biological name :si:dkey-15b23.3
  
Synonyms : si:dkey-15b23.3
  
Possible biological names infered from orthology : Q7Z5M5 / TMC3 / transmembrane channel like 3
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 11614144
Gene end: 11638126
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000142279
swissprot - A0A140LGA0
ZFIN ID - ZDB-GENE-141216-304
Ensembl - ENSDARG00000090696
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TMC3ENSGALG00000006376Gallus gallus
 TMC3ENSG00000188869Homo sapiens
 Tmc3ENSMUSG00000038540Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tmc1 / F1QFU0 / transmembrane channel-like 1 / Q8TDI8* / Q8R4P5* / Transmembrane channel-like protein 1 *ENSDARG0000005638618
tmc2b / F1QZE9 / transmembrane channel-like 2b / TMC2* / Q8TDI7* / Q8R4P4* / transmembrane channel like 2* / Transmembrane channel-like protein 2 *ENSDARG0000003031115
tmc2a / E7FFT2 / transmembrane channel-like 2a / TMC2* / Q8TDI7* / Q8R4P4* / transmembrane channel like 2* / Transmembrane channel-like protein 2 *ENSDARG0000003310415
si:dkey-202l16.5 / TMC5* / Q6UXY8* / Q32NZ6* / transmembrane channel like 5* / Transmembrane channel-like protein 5 *ENSDARG000000132528
tmc4 / transmembrane channel-like 4ENSDARG000000317578
tmc6a / transmembrane channel-like 6a / TMC6* / Q7Z403* / transmembrane channel like 6*ENSDARG000000697878
tmc8 / transmembrane channel-like 8 / Q7TN58* / Q8IU68* / Transmembrane channel-like protein 8 *ENSDARG000001010508


Protein motifs (from Interpro)
Interpro ID Name
 IPR012496  TMC domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr