ENSDARG00000090988


Danio rerio

Features
Gene ID: ENSDARG00000090988
  
Biological name :larsa
  
Synonyms : larsa / leucyl-tRNA synthetase a
  
Possible biological names infered from orthology : LARS / Leucine--tRNA ligase, cytoplasmic / leucyl-tRNA synthetase / Q8BMJ2 / Q9P2J5
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 54219304
Gene end: 54248182
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000106738
swissprot - E7F9F1
ZFIN ID - ZDB-GENE-110411-16
Ensembl - ENSDARG00000090988
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LARSENSGALG00000007494Gallus gallus
 LARSENSG00000133706Homo sapiens
 LarsENSMUSG00000024493Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
larsb / leucyl-tRNA synthetase b / LARS* / Q9P2J5* / Q8BMJ2* / leucyl-tRNA synthetase* / Leucine--tRNA ligase, cytoplasmic *ENSDARG000000192800


Protein motifs (from Interpro)
Interpro ID Name
 IPR001412  Aminoacyl-tRNA synthetase, class I, conserved site
 IPR002300  Aminoacyl-tRNA synthetase, class Ia
 IPR004493  Leucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolic
 IPR009008  Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
 IPR014729  Rossmann-like alpha/beta/alpha sandwich fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006418 tRNA aminoacylation for protein translation IEA
 biological_processGO:0006429 leucyl-tRNA aminoacylation IBA
 biological_processGO:0006438 valyl-tRNA aminoacylation IBA
 biological_processGO:0106074 aminoacyl-tRNA metabolism involved in translational fidelity IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0002161 aminoacyl-tRNA editing activity IEA
 molecular_functionGO:0004812 aminoacyl-tRNA ligase activity IEA
 molecular_functionGO:0004823 leucine-tRNA ligase activity IBA
 molecular_functionGO:0004832 valine-tRNA ligase activity IBA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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