ENSDARG00000091287


Danio rerio

Features
Gene ID: ENSDARG00000091287
  
Biological name :ebf3b
  
Synonyms : early B cell factor 3b / ebf3b
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 20219153
Gene end: 20229812
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000104863
Ensembl peptide - ENSDARP00000127718
NCBI entrez gene - 556476     See in Manteia.
RefSeq - XM_009292983
swissprot - F1R0D8
swissprot - X1WBX6
ZFIN ID - ZDB-GENE-131126-3
Ensembl - ENSDARG00000091287
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ebf3a / early B cell factor 3a / EBF3* / O08791* / Q9H4W6* / early B cell factor 3*ENSDARG0000010024471
ebf1a / ebf3a / early B cell factor 3a / EBF1* / Q9UH73* / Q07802* / early B cell factor 1*ENSDARG0000009984969
ebf1b / early B cell factor 1b / EBF1* / Q07802* / Q9UH73* / early B cell factor 1*ENSDARG0000006919668
ebf2 / early B cell factor 2 / O08792* / Q9HAK2*ENSDARG0000004252563
si:ch211-51e8.2 / EBF1 (1 of many) / EBF1* / Q07802* / Q9UH73* / early B cell factor 1*ENSDARG0000009263524


Protein motifs (from Interpro)
Interpro ID Name
 IPR002909  IPT domain
 IPR003523  Transcription factor COE
 IPR013783  Immunoglobulin-like fold
 IPR014756  Immunoglobulin E-set
 IPR018350  Transcription factor COE, conserved site
 IPR032200  Transcription factor COE, DNA-binding domain
 IPR032201  Transcription factor COE, helix-loop-helix domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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