ENSDARG00000092635


Danio rerio

Features
Gene ID: ENSDARG00000092635
  
Biological name :EBF1 (1 of many)
  
Synonyms : EBF1 (1 of many) / si:ch211-51e8.2
  
Possible biological names infered from orthology : early B cell factor 1 / EBF1 / Q07802 / Q9UH73
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 33973095
Gene end: 33995213
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000114469
swissprot - F1QJI0
ZFIN ID - ZDB-GENE-091118-125
Ensembl - ENSDARG00000092635
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 EBF1ENSGALG00000003699Gallus gallus
 EBF1ENSG00000164330Homo sapiens
 Ebf1ENSMUSG00000057098Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ebf1b / early B cell factor 1b / EBF1* / Q07802* / Q9UH73* / early B cell factor 1*ENSDARG0000006919695
ebf1a / ebf3a / early B cell factor 3a / EBF1* / Q9UH73* / Q07802* / early B cell factor 1*ENSDARG0000009984991
ebf3a / early B cell factor 3a / EBF3* / O08791* / Q9H4W6* / early B cell factor 3*ENSDARG0000010024482
ebf2 / early B cell factor 2 / O08792* / Q9HAK2*ENSDARG0000004252571
ebf3b / early B cell factor 3bENSDARG0000009128763


Protein motifs (from Interpro)
Interpro ID Name
 IPR003523  Transcription factor COE
 IPR018350  Transcription factor COE, conserved site
 IPR032200  Transcription factor COE, DNA-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr