ENSGALG00000003699


Gallus gallus
transcriptionEBF1factorcoedomaindna-bindingdna-templatedbindingactivityiptimmunoglobulin-likefoldimmunoglobuline-setconservedsitehelix-loop-helixregulationmulticellularorganismdevelopmentnucleusdnametalionproteindimerization

Features
Gene ID: ENSGALG00000003699
  
Biological name :EBF1
  
Synonyms : early B cell factor 1 / EBF1
  
Possible biological names infered from orthology : Q07802 / Q9UH73
  
Species: Gallus gallus
  
Chr. number: 13
Strand: 1
Band:
Gene start: 10683921
Gene end: 10944830
  
Corresponding Affymetrix probe sets: Gga.276.1.S1_at (Chicken Array)   Gga.276.2.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000045449
Ensembl peptide - ENSGALP00000028428
NCBI entrez gene - 395512     See in Manteia.
RefSeq - XM_015293741
RefSeq - XM_015293738
RefSeq - XM_015293739
RefSeq - XM_015293740
RefSeq - NM_204752
RefSeq - XM_015293734
RefSeq - XM_015293735
RefSeq - XM_015293736
RefSeq - XM_015293737
RefSeq Peptide - NP_990083
swissprot - F1N9Q3
swissprot - A0A1D5NYJ1
Ensembl - ENSGALG00000003699
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ebf1aENSDARG00000099849Danio rerio
 ebf1bENSDARG00000069196Danio rerio
 si:ch211-51e8.2ENSDARG00000092635Danio rerio
 EBF1ENSG00000164330Homo sapiens
 Ebf1ENSMUSG00000057098Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
EBF3 / early B cell factor 3 / O08791* / Q9H4W6*ENSGALG0000001046187
EBF2 / early B cell factor 2 / O08792* / Q9HAK2*ENSGALG0000000024275


Protein motifs (from Interpro)
Interpro ID Name
 IPR002909  IPT domain
 IPR003523  Transcription factor COE
 IPR013783  Immunoglobulin-like fold
 IPR014756  Immunoglobulin E-set
 IPR018350  Transcription factor COE, conserved site
 IPR032200  Transcription factor COE, DNA-binding domain
 IPR032201  Transcription factor COE, helix-loop-helix domain


Gene Ontology (GO)
nitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentnitrogen compound metabnitrogen compound metabolic processbiosynthetic processbiosynthetic processcellular metabolic proccellular metabolic processprimary metabolic proceprimary metabolic processorganic substance metaborganic substance metabolic processanatomical structure deanatomical structure development
organic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityion bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityion bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityion bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityion bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityion bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityion bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityion bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityion bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityion bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityion bindingprotein bindingorganic cyclic compound bindorganic cyclic compound bindingheterocyclic compound bindinheterocyclic compound bindingDNA-binding transcription faDNA-binding transcription factor activityion bindingion bindingprotein bindingprotein binding
cellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellcellorganelleorganelle
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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