ENSDARG00000091618


Danio rerio

Features
Gene ID: ENSDARG00000091618
  
Biological name :cltcl1
  
Synonyms : clathrin, heavy chain-like 1 / cltcl1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 2017428
Gene end: 2100808
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000109883
NCBI entrez gene - 100330183     See in Manteia.
RefSeq - XM_021478541
swissprot - E7FBE5
ZFIN ID - ZDB-GENE-130530-1029
Ensembl - ENSDARG00000091618
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cltca / clathrin, heavy chain a (Hc)ENSDARG0000004349379
cltcb / clathrin, heavy chain b (Hc) / CLTC* / Q00610* / clathrin heavy chain*ENSDARG0000009071679


Protein motifs (from Interpro)
Interpro ID Name
 IPR000547  Clathrin, heavy chain/VPS, 7-fold repeat
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR012331  Clathrin, heavy chain, linker
 IPR015348  Clathrin, heavy chain, linker, core motif
 IPR016024  Armadillo-type fold
 IPR016341  Clathrin, heavy chain
 IPR022365  Clathrin, heavy chain, propeller repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0048268 clathrin coat assembly IEA
 cellular_componentGO:0005905 clathrin-coated pit IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030130 clathrin coat of trans-Golgi network vesicle IEA
 cellular_componentGO:0030132 clathrin coat of coated pit IEA
 cellular_componentGO:0030659 cytoplasmic vesicle membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0071439 clathrin complex IEA
 molecular_functionGO:0005198 structural molecule activity IEA
 molecular_functionGO:0032051 clathrin light chain binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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