ENSDARG00000096992


Danio rerio

Features
Gene ID: ENSDARG00000096992
  
Biological name :zgc:153405
  
Synonyms : zgc:153405
  
Possible biological names infered from orthology : Gm6970 / HIST1H1A / HIST1H1B / HIST1H1C / HIST1H1D / HIST1H1E / HIST1H1T / histone cluster 1, H1c / histone cluster 1 H1 family member a / histone cluster 1 H1 family member b / histone cluster 1 H1 family member c / histone cluster 1 H1 family member d / histone cluster 1 H1 family member e / histone cluster 1 H1 family member t / Histone H1.1 / Histone H1.3 / Histone H1.4 / Histone H1.5 / P10412 / P15864 / P16401 / P16402 / P16403 / P22492 / P43274 / P43275 / P43276 / P43277 / Q02539
  
Species: Danio rerio
  
Chr. number: 25
Strand: -1
Band:
Gene start: 35153283
Gene end: 35153985
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000129366
NCBI entrez gene - 751661     See in Manteia.
RefSeq - NM_001045378
RefSeq Peptide - NP_001038843
swissprot - X1WGK9
ZFIN ID - ZDB-GENE-060825-170
Ensembl - ENSDARG00000096992
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000011747Gallus gallus
 HIST1H111RENSGALG00000011783Gallus gallus
 P08284ENSGALG00000031874Gallus gallus
 P08285ENSGALG00000037167Gallus gallus
 P08286ENSGALG00000031159Gallus gallus
 P10412ENSG00000168298Homo sapiens
 P16401ENSG00000184357Homo sapiens
 P16402ENSG00000124575Homo sapiens
 P16403ENSG00000187837Homo sapiens
 P22492ENSG00000187475Homo sapiens
 Q02539ENSG00000124610Homo sapiens
 Gm6970ENSMUSG00000091230Mus musculus
 Hist1h1tENSMUSG00000036211Mus musculus
 P15864ENSMUSG00000036181Mus musculus
 P43274ENSMUSG00000051627Mus musculus
 P43275ENSMUSG00000049539Mus musculus
 P43276ENSMUSG00000058773Mus musculus
 P43277ENSMUSG00000052565Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-113a14.24 / P22492* / P16403* / P16402* / P16401* / P15864* / P10412* / Gm6970* / Q02539* / P43277* / P43276* / P43275* / P43274* / HIST1H1A* / HIST1H1B* / HIST1H1C* / HIST1H1D* / ...ENSDARG0000005171896
si:ch211-113a14.18 / P22492* / P16403* / P16402* / P16401* / P15864* / P10412* / Gm6970* / Q02539* / P43277* / P43276* / P43275* / P43274* / HIST1H1A* / HIST1H1B* / HIST1H1C* / HIST1H1D* / ...ENSDARG0000005173596
si:dkey-261m9.12 / P22492* / P16403* / P16402* / P16401* / P15864* / P10412* / Gm6970* / Q02539* / P43277* / P43276* / P43275* / P43274* / HIST1H1A* / HIST1H1B* / HIST1H1C* / HIST1H1D* / HI...ENSDARG0000003263795
si:dkey-108k21.10 / P22492* / P16403* / P16402* / P16401* / P15864* / P10412* / Gm6970* / Q02539* / P43277* / P43276* / P43275* / P43274* / HIST1H1A* / HIST1H1B* / HIST1H1C* / HIST1H1D* / H...ENSDARG0000007550895
zgc:110216 / si:ch211-113a14.12 / P16403* / P16402* / P16401* / P10412* / P15864* / Gm6970* / Q02539* / P43277* / P43276* / P43275* / P22492* / P43274* / HIST1H1A* / HIST1H1B* / HIST1H1C* /...ENSDARG0000007745695
si:ch73-36p18.1 / P22492* / P16403* / P16402* / P16401* / P15864* / P10412* / Gm6970* / Q02539* / P43277* / P43276* / P43275* / P43274* / HIST1H1A* / HIST1H1B* / HIST1H1C* / HIST1H1D* / HIS...ENSDARG0000011576694
si:dkey-108k21.21 / P22492* / P16403* / P16402* / P16401* / P15864* / P10412* / Gm6970* / Q02539* / P43277* / P43276* / P43275* / P43274* / HIST1H1A* / HIST1H1B* / HIST1H1C* / HIST1H1D* / H...ENSDARG0000009190593
si:dkey-108k21.14 / P22492* / P16403* / P16402* / P16401* / P15864* / P10412* / Gm6970* / Q02539* / P43277* / P43276* / P43275* / P43274* / HIST1H1A* / HIST1H1B* / HIST1H1C* / HIST1H1D* / H...ENSDARG0000011084193
si:dkey-23a13.17 / P22492* / P16403* / P16402* / P16401* / P15864* / P10412* / Gm6970* / Q02539* / P43277* / P43276* / P43275* / P43274* / HIST1H1A* / HIST1H1B* / HIST1H1C* / HIST1H1D* / HI...ENSDARG0000010532892
si:ch73-368j24.11 / P22492* / P16403* / P16402* / P16401* / P15864* / P10412* / Gm6970* / Q02539* / P43277* / P43276* / P43275* / P43274* / HIST1H1A* / HIST1H1B* / HIST1H1C* / HIST1H1D* / H...ENSDARG0000010543092
si:dkey-23a13.9 / P22492* / P16403* / P16402* / P16401* / P15864* / P10412* / Gm6970* / Q02539* / P43277* / P43276* / P43275* / P43274* / HIST1H1A* / HIST1H1B* / HIST1H1C* / HIST1H1D* / HIS...ENSDARG0000010543190
si:ch73-368j24.12 / P22492* / P16403* / P16402* / P16401* / P15864* / P10412* / Gm6970* / Q02539* / P43277* / P43276* / P43275* / P43274* / HIST1H1A* / HIST1H1B* / HIST1H1C* / HIST1H1D* / H...ENSDARG0000010550290
si:ch1073-153i20.4 / P22492* / P16403* / P16402* / P16401* / P15864* / P10412* / Gm6970* / Q02539* / P43277* / P43276* / P43275* / P43274* / HIST1H1A* / HIST1H1B* / HIST1H1C* / HIST1H1D* / ...ENSDARG0000010535089
si:ch1073-159d7.7 / P22492* / P16403* / P16402* / P16401* / P15864* / P10412* / Gm6970* / Q02539* / P43277* / P43276* / P43275* / P43274* / HIST1H1A* / HIST1H1B* / HIST1H1C* / HIST1H1D* / H...ENSDARG0000007401288
zgc:110425 / P22492* / P16403* / P16402* / P16401* / P15864* / P10412* / Gm6970* / Q02539* / P43277* / P43276* / P43275* / P43274* / HIST1H1A* / HIST1H1B* / HIST1H1C* / HIST1H1D* / HIST1H1E...ENSDARG0000005847974
histh1l / histone H1 like / Q02539* / Gm6970* / P10412* / P15864* / P16401* / P16402* / P16403* / P22492* / P43274* / P43275* / P43276* / P43277* / HIST1H1C* / HIST1H1B* / HIST1H1A* / HIST1...ENSDARG0000003551967
si:ch211-103n10.5 / P22492* / P16403* / P16402* / P16401* / P15864* / P10412* / Gm6970* / Q02539* / P43277* / P43276* / P43275* / P43274* / HIST1H1A* / HIST1H1B* / HIST1H1C* / HIST1H1D* / H...ENSDARG0000007750448
zgc:163061 / P22492* / P16403* / P16402* / P16401* / P10412* / Q02539* / HIST1H1B* / HIST1H1C* / HIST1H1D* / HIST1H1E* / HIST1H1T* / HIST1H1A* / histone cluster 1 H1 family member e* / hist...ENSDARG0000007553837
zgc:163061 / P22492* / P16403* / P16402* / P16401* / P10412* / Q02539* / HIST1H1B* / HIST1H1C* / HIST1H1D* / HIST1H1E* / HIST1H1T* / HIST1H1A* / histone cluster 1 H1 family member e* / hist...ENSDARG0000007676637


Protein motifs (from Interpro)
Interpro ID Name
 IPR005818  Linker histone H1/H5, domain H15
 IPR005819  Histone H5
 IPR011991  ArsR-like helix-turn-helix domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006334 nucleosome assembly IEA
 cellular_componentGO:0000786 nucleosome IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005694 chromosome IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
Activation of DNA fragmentation factor
Formation of Senescence-Associated Heterochromatin Foci (SAHF)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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