ENSDARG00000098880


Danio rerio

Features
Gene ID: ENSDARG00000098880
  
Biological name :pclob
  
Synonyms : pclob / piccolo presynaptic cytomatrix protein b
  
Possible biological names infered from orthology : PCLO / piccolo presynaptic cytomatrix protein / Protein piccolo / Q9QYX7 / Q9Y6V0
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 9615147
Gene end: 9722291
  
Corresponding Affymetrix probe sets: Dr.22774.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000151687
Ensembl peptide - ENSDARP00000155153
Ensembl peptide - ENSDARP00000132114
Ensembl peptide - ENSDARP00000145288
NCBI entrez gene - 565842     See in Manteia.
RefSeq - XM_017352021
swissprot - A0A0R4IGI4
ZFIN ID - ZDB-GENE-030131-8100
Ensembl - ENSDARG00000098880
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000037435Gallus gallus
 ENSGALG00000039659Gallus gallus
 ENSGALG00000040151Gallus gallus
 PCLOENSG00000186472Homo sapiens
 PcloENSMUSG00000061601Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pcloa / piccolo presynaptic cytomatrix protein a / PCLO* / Q9QYX7* / Q9Y6V0* / Protein piccolo * / piccolo presynaptic cytomatrix protein*ENSDARG0000006329922
bsnb / bassoon (presynaptic cytomatrix protein) b / BSN* / Q9UPA5* / O88737* / Protein bassoon * / bassoon presynaptic cytomatrix protein*ENSDARG000000791619
CABZ01086611.1 / BSN* / O88737* / Q9UPA5* / Protein bassoon * / bassoon presynaptic cytomatrix protein*ENSDARG000001111105


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR001478  PDZ domain
 IPR001565  Synaptotagmin
 IPR008899  Zinc finger, piccolo-type
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR030629  Protein piccolo


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007416 synapse assembly IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0048786 presynaptic active zone IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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