ENSDARG00000099108


Danio rerio

Features
Gene ID: ENSDARG00000099108
  
Biological name :clic6
  
Synonyms : chloride intracellular channel 6 / clic6
  
Possible biological names infered from orthology : Chloride intracellular channel protein 6 / Q8BHB9 / Q96NY7
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 1618994
Gene end: 1631399
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000135191
Ensembl peptide - ENSDARP00000144458
swissprot - A0A286YBT4
swissprot - R4GEX1
ZFIN ID - ZDB-GENE-121214-172
Ensembl - ENSDARG00000099108
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CLIC6ENSGALG00000016020Gallus gallus
 CLIC6ENSG00000159212Homo sapiens
 Clic6ENSMUSG00000022949Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
clic4 / chloride intracellular channel 4 / Q9QYB1* / Q9Y696* / Chloride intracellular channel protein 4 *ENSDARG0000002299569
clic5b / chloride intracellular channel 5b / CLIC5* / Q9NZA1* / Q8BXK9* / chloride intracellular channel 5* / Chloride intracellular channel protein 5 *ENSDARG0000007058468
clic5a / chloride intracellular channel 5a / CLIC5* / Q9NZA1* / Q8BXK9* / chloride intracellular channel 5* / Chloride intracellular channel protein 5 *ENSDARG0000007599368
clic1 / chloride intracellular channel 1 / O00299*ENSDARG0000010334063
clic3 / chloride intracellular channel 3 / O95833* / Q9D7P7* / Chloride intracellular channel protein 3 *ENSDARG0000004477659
clic2 / chloride intracellular channel 2 / O15247*ENSDARG0000001062556


Protein motifs (from Interpro)
Interpro ID Name
 IPR002946  Intracellular chloride channel
 IPR004045  Glutathione S-transferase, N-terminal
 IPR010987  Glutathione S-transferase, C-terminal-like
 IPR012336  Thioredoxin-like fold
 IPR030264  Chloride intracellular channel protein 5


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006821 chloride transport IEA
 biological_processGO:0034220 ion transmembrane transport IEA
 biological_processGO:0034765 regulation of ion transmembrane transport IEA
 biological_processGO:1902476 chloride transmembrane transport IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0034707 chloride channel complex IEA
 molecular_functionGO:0005244 voltage-gated ion channel activity IEA
 molecular_functionGO:0005254 chloride channel activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism anterior-posterior axis curved , abnormal
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 ZFA:0001261 ventricular system ventricular system hydrocephalic , abnormal
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 ZFA:0001617 otolith otolith morphology , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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