ENSDARG00000103340


Danio rerio

Features
Gene ID: ENSDARG00000103340
  
Biological name :clic1
  
Synonyms : chloride intracellular channel 1 / clic1
  
Possible biological names infered from orthology : Chloride intracellular channel protein 1 / O00299 / Q9Z1Q5
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 18758014
Gene end: 18766405
  
Corresponding Affymetrix probe sets: Dr.1735.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000139434
swissprot - A0A0R4IRJ8
ZFIN ID - ZDB-GENE-030131-3202
Ensembl - ENSDARG00000103340
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CLIC1ENSG00000213719Homo sapiens
 Clic1ENSMUSG00000007041Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
clic4 / chloride intracellular channel 4 / Q9QYB1* / Q9Y696* / Chloride intracellular channel protein 4 *ENSDARG0000002299570
clic5b / chloride intracellular channel 5b / CLIC5* / Q9NZA1* / Q8BXK9* / chloride intracellular channel 5* / Chloride intracellular channel protein 5 *ENSDARG0000007058467
clic5a / chloride intracellular channel 5a / CLIC5* / Q9NZA1* / Q8BXK9* / chloride intracellular channel 5* / Chloride intracellular channel protein 5 *ENSDARG0000007599367
clic6 / chloride intracellular channel 6 / Q8BHB9* / Q96NY7* / Chloride intracellular channel protein 6 *ENSDARG0000009910866
clic3 / chloride intracellular channel 3 / O95833* / Q9D7P7* / Chloride intracellular channel protein 3 *ENSDARG0000004477665
clic2 / chloride intracellular channel 2 / O15247*ENSDARG0000001062559


Protein motifs (from Interpro)
Interpro ID Name
 IPR002946  Intracellular chloride channel
 IPR004045  Glutathione S-transferase, N-terminal
 IPR010987  Glutathione S-transferase, C-terminal-like
 IPR012336  Thioredoxin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006821 chloride transport IEA
 biological_processGO:0034220 ion transmembrane transport IEA
 biological_processGO:0034765 regulation of ion transmembrane transport IEA
 biological_processGO:0051726 regulation of cell cycle IEA
 biological_processGO:1902476 chloride transmembrane transport IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0034707 chloride channel complex IEA
 molecular_functionGO:0005244 voltage-gated ion channel activity IEA
 molecular_functionGO:0005254 chloride channel activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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