ENSDARG00000099679


Danio rerio
papnucleotidyldomainactivitypapd4

Features
Gene ID: ENSDARG00000099679
  
Biological name :papd4
  
Synonyms : PAP associated domain containing 4 / papd4
  
Possible biological names infered from orthology : poly(A) RNA polymerase D4, non-canonical / Q6PIY7 / Q91YI6
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 51833132
Gene end: 51847896
  
Corresponding Affymetrix probe sets: Dr.15183.1.A1_at (Zebrafish Array)   NM_001020600_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000133742
Ensembl peptide - ENSDARP00000138757
Ensembl peptide - ENSDARP00000135183
NCBI entrez gene - 553626     See in Manteia.
RefSeq - NM_001020600
RefSeq Peptide - NP_001018436
swissprot - A0A0R4IRV1
swissprot - A0A0R4IMS7
swissprot - A0A0R4IGZ5
ZFIN ID - ZDB-GENE-050522-536
Ensembl - ENSDARG00000099679
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PAPD4ENSGALG00000014810Gallus gallus
 PAPD4ENSG00000164329Homo sapiens
 Papd4ENSMUSG00000042167Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CABZ01065131.1 / Q5TAX3* / ZCCHC11* / zinc finger CCHC-type containing 11*ENSDARG0000010140420
tut1 / terminal uridylyl transferase 1, U6 snRNA-specific / Q8R3F9* / Q9H6E5* / AP002990.1*ENSDARG0000005732117
mtpap / mitochondrial poly(A) polymerase / Q9D0D3* / Q9NVV4* / Poly(A) RNA polymerase, mitochondrial *ENSDARG0000007615515
CABZ01032476.1 / Q5VYS8* / ZCCHC6* / zinc finger CCHC-type containing 6* / zinc finger, CCHC domain containing 6*ENSDARG0000007464512
zcchc11 / zinc finger, CCHC domain containing 11 / Q5TAX3* / zinc finger CCHC-type containing 11*ENSDARG000000702711


Protein motifs (from Interpro)
Interpro ID Name
 IPR002058  PAP/25A-associated
 IPR002934  Polymerase, nucleotidyl transferase domain


Gene Ontology (GO)
transferase activitytransferase activitytransferase activitytransferase activitytransferase activitytransferase activitytransferase activitytransferase activitytransferase activitytransferase activitytransferase activitytransferase activity
TypeGO IDTermEv.Code
 molecular_functionGO:0016779 nucleotidyltransferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr