ENSDARG00000101081


Danio rerio

Features
Gene ID: ENSDARG00000101081
  
Biological name :ptprub
  
Synonyms : protein tyrosine phosphatase, receptor type, U, b / ptprub
  
Possible biological names infered from orthology : B1AUH1 / protein tyrosine phosphatase, receptor type U / PTPRU / Q92729
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 34916162
Gene end: 35330001
  
Corresponding Affymetrix probe sets: Dr.12134.4.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000135991
Ensembl peptide - ENSDARP00000151842
Ensembl peptide - ENSDARP00000144361
Ensembl peptide - ENSDARP00000139263
Ensembl peptide - ENSDARP00000136752
NCBI entrez gene - 335096     See in Manteia.
RefSeq - XM_009292422
RefSeq - XM_009292423
RefSeq - XM_009292426
RefSeq - XM_009292427
RefSeq - NM_001002299
RefSeq Peptide - NP_001002299
swissprot - A0A286YB08
swissprot - A0A0R4ITF5
swissprot - A0A0R4INY1
swissprot - A0A0J9YJD5
ZFIN ID - ZDB-GENE-030131-7036
Ensembl - ENSDARG00000101081
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PTPRUENSGALG00000031440Gallus gallus
 PTPRUENSG00000060656Homo sapiens
 PtpruENSMUSG00000028909Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ptprua / protein tyrosine phosphatase, receptor type, U, a / PTPRU* / B1AUH1* / Q92729* / protein tyrosine phosphatase, receptor type U*ENSDARG0000009263881
ptprt / protein tyrosine phosphatase, receptor type, t / O14522* / Q99M80* / Receptor-type tyrosine-protein phosphatase T *ENSDARG0000007478151
ptprk / protein tyrosine phosphatase, receptor type, K / P35822* / Q15262*ENSDARG0000006341646
ptprfb / A4IFW2 / protein tyrosine phosphatase, receptor type, f, b / PTPRF* / P10586* / A2A8L5* / Receptor-type tyrosine-protein phosphatase F * / protein tyrosine phosphatase, receptor type F*ENSDARG0000000575426
ptprt / protein tyrosine phosphatase, receptor type, t / O14522*ENSDARG0000009757226
ptprfa / protein tyrosine phosphatase, receptor type, f, a / PTPRF* / A2A8L5* / P10586* / protein tyrosine phosphatase, receptor type F* / Receptor-type tyrosine-protein phosphatase F *ENSDARG0000010347926
ptprsa / protein tyrosine phosphatase, receptor type, s, a / PTPRS* / B0V2N1* / Q13332* / Receptor-type tyrosine-protein phosphatase S * / protein tyrosine phosphatase, receptor type S*ENSDARG0000005973825
ptprga / protein tyrosine phosphatase, receptor type, g a / PTPRG* / P23470* / protein tyrosine phosphatase, receptor type G*ENSDARG0000004500618
ca16b / carbonic anhydrase XVI b / PTPRG* / P23470* / protein tyrosine phosphatase, receptor type G* / receptor-type tyrosine-protein phosphatase gamma isoform 2 *ENSDARG0000006012318
ptprz1b / protein tyrosine phosphatase, receptor-type, Z polypeptide 1b / B9EKR1* / P23471* / PTPRZ1* / protein tyrosine phosphatase, receptor type Z1* / protein tyrosine phosphatase, recep...ENSDARG0000002087117
ptprz1a / protein tyrosine phosphatase, receptor-type, Z polypeptide 1a / B9EKR1* / P23471* / PTPRZ1* / protein tyrosine phosphatase, receptor type Z1* / protein tyrosine phosphatase, recep...ENSDARG0000005181417
ptprsa / protein tyrosine phosphatase, receptor type, s, a / PTPRS* / Q13332* / protein tyrosine phosphatase, receptor type S*ENSDARG0000011094017
ptprc / protein tyrosine phosphatase, receptor type, CENSDARG0000007143716
ptpra / protein tyrosine phosphatase, receptor type, A / P18052* / P18433*ENSDARG0000000176915
ptprea / protein tyrosine phosphatase, receptor type, E, a / PTPRE* / P49446* / P23469* / protein tyrosine phosphatase, receptor type E* / Receptor-type tyrosine-protein phosphatase epsilon *ENSDARG0000001589114
ptpreb / protein tyrosine phosphatase, receptor type, E, b / PTPRE* / P49446* / P23469* / protein tyrosine phosphatase, receptor type E* / Receptor-type tyrosine-protein phosphatase epsilon *ENSDARG0000002115114
si:ch1073-391i24.1 / PTPRM* / P28827* / P28828* / protein tyrosine phosphatase, receptor type M*ENSDARG0000008917214
CABZ01084131.1 / PTPRM* / P28827* / protein tyrosine phosphatase, receptor type M*ENSDARG0000011476214


Protein motifs (from Interpro)
Interpro ID Name
 IPR000242  PTP type protein phosphatase
 IPR000387  Tyrosine specific protein phosphatases domain
 IPR000998  MAM domain
 IPR003595  Protein-tyrosine phosphatase, catalytic
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR013783  Immunoglobulin-like fold
 IPR016130  Protein-tyrosine phosphatase, active site
 IPR029021  Protein-tyrosine phosphatase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006470 protein dephosphorylation IEA
 biological_processGO:0016311 dephosphorylation IEA
 biological_processGO:0035335 peptidyl-tyrosine dephosphorylation IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004721 phosphoprotein phosphatase activity IEA
 molecular_functionGO:0004725 protein tyrosine phosphatase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016791 phosphatase activity IEA


Pathways (from Reactome)
Pathway description
Signaling by SCF-KIT


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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