ENSDARG00000101085


Danio rerio

Features
Gene ID: ENSDARG00000101085
  
Biological name :ss18l2
  
Synonyms : ss18l2 / synovial sarcoma translocation gene on chromosome 18-like 2
  
Possible biological names infered from orthology : Q9D174 / Q9UHA2 / SS18 like 2 / SS18, nBAF chromatin remodeling complex subunit like 2
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 328689
Gene end: 330937
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000141103
NCBI entrez gene - 550446     See in Manteia.
RefSeq - NM_001159821
RefSeq Peptide - NP_001153293
swissprot - Q567E9
ZFIN ID - ZDB-GENE-050417-268
Ensembl - ENSDARG00000101085
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SS18L2ENSGALG00000004943Gallus gallus
 Q9UHA2ENSG00000008324Homo sapiens
 Q9D174ENSMUSG00000032526Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ss18 / synovial sarcoma translocation, chromosome 18 (H. sapiens) / Q15532* / SS18, nBAF chromatin remodeling complex subunit*ENSDARG0000000297049


Protein motifs (from Interpro)
Interpro ID Name
 IPR007726  SS18 family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 biological_processGO:1903506 regulation of nucleic acid-templated transcription IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003713 transcription coactivator activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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