ENSDARG00000101222


Danio rerio

Features
Gene ID: ENSDARG00000101222
  
Biological name :lsm10
  
Synonyms : lsm10 / LSM10, U7 small nuclear RNA associated / oscp1a
  
Possible biological names infered from orthology : Q8QZX5 / Q969L4 / U7 snRNP-specific Sm-like protein LSM10
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 3840955
Gene end: 3846637
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000138931
Ensembl peptide - ENSDARP00000136407
NCBI entrez gene - 100536270     See in Manteia.
NCBI entrez gene - 101884591     See in Manteia.
swissprot - A0A0R4IV27
swissprot - F1Q940
ZFIN ID - ZDB-GENE-080204-2
ZFIN ID - ZDB-GENE-090508-7
Ensembl - ENSDARG00000101222
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LSM10ENSGALG00000002127Gallus gallus
 LSM10ENSG00000181817Homo sapiens
 Lsm10ENSMUSG00000050188Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001163  LSM domain, eukaryotic/archaea-type
 IPR010920  LSM domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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