ENSDARG00000101704


Danio rerio
leucine-richrepeatsubtypelrrc24immunoglobulinimmunoglobulin-likedomainmembranecysteine-richflankingregionc-terminaltypicalfoldsuperfamilyintegralcomponentproteinbinding

Features
Gene ID: ENSDARG00000101704
  
Biological name :lrrc24
  
Synonyms : leucine rich repeat containing 24 / lrrc24
  
Possible biological names infered from orthology : Leucine-rich repeat-containing protein 24 / Q50LG9 / Q8BHA1
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 51183320
Gene end: 51199922
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000132505
Ensembl peptide - ENSDARP00000135925
swissprot - A0A0R4IC56
swissprot - A0A0R4IPP0
ZFIN ID - ZDB-GENE-060503-496
Ensembl - ENSDARG00000101704
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LRRC24ENSG00000254402Homo sapiens
 Lrrc24ENSMUSG00000033707Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rtn4rl1a / reticulon 4 receptor-like 1a / Q86UN2* / Q8K0S5* / RTN4RL1* / reticulon 4 receptor like 1*ENSDARG0000000785617
rtn4r / reticulon 4 receptor / Q99PI8* / Q9BZR6*ENSDARG0000009003517
rtn4rl2b / reticulon 4 receptor-like 2b / Q7M6Z0* / Q86UN3* / RTN4RL2* / reticulon 4 receptor like 2*ENSDARG0000003749516
rtn4rl2a / reticulon 4 receptor-like 2 a / Q7M6Z0* / Q86UN3* / RTN4RL2* / reticulon 4 receptor like 2*ENSDARG0000005201216
rtn4rl1b / reticulon 4 receptor-like 1b / Q86UN2* / RTN4RL1* / reticulon 4 receptor like 1*ENSDARG0000009852816
lrrc38a / leucine rich repeat containing 38a / A2VDH3* / LRRC38* / Q5VT99* / leucine rich repeat containing 38* / Leucine-rich repeat-containing protein 38 *ENSDARG0000007514714
lrrc38b / leucine rich repeat containing 38b / A2VDH3* / LRRC38* / Q5VT99* / leucine rich repeat containing 38* / Leucine-rich repeat-containing protein 38 *ENSDARG0000008774514
LRRC52 / si:dkey-52j6.3 / Q5M8M9* / Q8N7C0* / leucine rich repeat containing 52* / Leucine-rich repeat-containing protein 52 *ENSDARG0000009069814
lrtm2a / leucine-rich repeats and transmembrane domains 2a / LRTM2* / Q8BGX3* / Q8N967* / leucine rich repeats and transmembrane domains 2* / Leucine-rich repeat and transmembrane domain-co...ENSDARG0000004548313
si:ch211-237i5.4ENSDARG0000008883313
lrtm1 / leucine rich repeats and transmembrane domains 1 / Q9HBL6*ENSDARG0000009874213
CABZ01112864.1 / LRRC52* / Q8N7C0* / leucine rich repeat containing 52*ENSDARG0000009993713
lrtm2b / leucine-rich repeats and transmembrane domains 2b / LRTM2* / Q8BGX3* / Q8N967* / leucine rich repeats and transmembrane domains 2* / Leucine-rich repeat and transmembrane domain-co...ENSDARG0000004581112


Protein motifs (from Interpro)
Interpro ID Name
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013783  Immunoglobulin-like fold
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
protein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein binding
membranemembranemembranemembranemembranemembranemembranemembranemembranemembranemembranemembrane
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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