ENSDARG00000102025


Danio rerio

Features
Gene ID: ENSDARG00000102025
  
Biological name :znf644b
  
Synonyms : zinc finger protein 644b / znf644b
  
Possible biological names infered from orthology : Q9H582 / Zfp644 / zinc finger protein 644 / ZNF644
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 24660817
Gene end: 24698140
  
Corresponding Affymetrix probe sets: Dr.14410.1.A1_at (Zebrafish Array)   Dr.24428.2.A1_a_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000130410
Ensembl peptide - ENSDARP00000152952
NCBI entrez gene - 100537559     See in Manteia.
swissprot - A0A0R4IBX8
ZFIN ID - ZDB-GENE-120214-23
Ensembl - ENSDARG00000102025
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ZNF644ENSGALG00000034253Gallus gallus
 Q9H582ENSG00000122482Homo sapiens
 Zfp644ENSMUSG00000049606Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
znf644a / zinc finger protein 644a / Q9H582* / Zfp644* / ZNF644* / zinc finger protein 644*ENSDARG0000010136120
si:ch211-194b1.1 / WIZ* / O88286* / O95785* / widely interspaced zinc finger motifs*ENSDARG0000010243611
si:dkey-217d24.6 / WIZ* / O88286* / O95785* / widely interspaced zinc finger motifs*ENSDARG000000964288


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0060219 camera-type eye photoreceptor cell differentiation IGI
 biological_processGO:0060968 regulation of gene silencing IMP
 biological_processGO:0070050 neuron cellular homeostasis IMP
 cellular_componentGO:0005623 cell IEA
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000029 hindbrain hindbrain neuron spatial pattern , abnormal
hindbrain neuron mislocalised , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000128 midbrain midbrain morphology , abnormal
midbrain apoptotic process increased occurrence , abnormal
midbrain spatial pattern , abnormal
midbrain mislocalised , abnormal
midbrain decreased amount , abnormal
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 ZFA:0000152 retina retina increased amount , abnormal
retina apoptotic process increased occurrence , abnormal
retina multi fate stem cell spatial pattern , abnormal
retina multi fate stem cell increased amount , abnormal
retina central region spatial pattern , abnormal
retina central region mislocalised , abnormal
retina cell proliferation increased occurrence , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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