ENSDARG00000102846


Danio rerio

Features
Gene ID: ENSDARG00000102846
  
Biological name :trmt13
  
Synonyms : trmt13 / tRNA methyltransferase 13 homolog (S. cerevisiae)
  
Possible biological names infered from orthology : Q8BYH3 / Q9NUP7 / tRNA methyltransferase 13 / tRNA methyltransferase 13 homolog
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 16311740
Gene end: 16317886
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000130467
NCBI entrez gene - 541496     See in Manteia.
RefSeq - NM_001014309
RefSeq Peptide - NP_001014331
swissprot - A0A0R4ID18
ZFIN ID - ZDB-GENE-050327-19
Ensembl - ENSDARG00000102846
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRMT13ENSGALG00000005290Gallus gallus
 Q9NUP7ENSG00000122435Homo sapiens
 Q8BYH3ENSMUSG00000033439Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007871  Methyltransferase TRM13
 IPR021721  Zinc finger, CCCH-type, TRM13
 IPR022776  TRM13/UPF0224 family, U11-48K-like CHHC zinc finger domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0032259 methylation IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0008168 methyltransferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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