ENSGALG00000005290


Gallus gallus

Features
Gene ID: ENSGALG00000005290
  
Biological name :TRMT13
  
Synonyms : TRMT13 / tRNA methyltransferase 13 homolog
  
Possible biological names infered from orthology : Q8BYH3 / Q9NUP7 / tRNA methyltransferase 13
  
Species: Gallus gallus
  
Chr. number: 8
Strand: -1
Band:
Gene start: 11915863
Gene end: 11922396
  
Corresponding Affymetrix probe sets: Gga.11294.1.A1_at (Chicken Array)   Gga.11294.1.S1_at (Chicken Array)   GgaAffx.26467.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000008467
NCBI entrez gene - 424470     See in Manteia.
RefSeq - XM_422313
swissprot - F1P1W7
Ensembl - ENSGALG00000005290
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trmt13ENSDARG00000102846Danio rerio
 Q9NUP7ENSG00000122435Homo sapiens
 Q8BYH3ENSMUSG00000033439Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007871  Methyltransferase TRM13
 IPR021721  Zinc finger, CCCH-type, TRM13
 IPR022776  TRM13/UPF0224 family, U11-48K-like CHHC zinc finger domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0030488 tRNA methylation IBA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0008175 tRNA methyltransferase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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