ENSDARG00000103155


Danio rerio

Features
Gene ID: ENSDARG00000103155
  
Biological name :ext1a
  
Synonyms : exostosin glycosyltransferase 1a / ext1a / Q5IGR8
  
Possible biological names infered from orthology : Exostosin-1 / exostosin glycosyltransferase 1 / EXT1 / P97464 / Q16394
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 48460873
Gene end: 48573510
  
Corresponding Affymetrix probe sets: Dr.12138.1.S1_at (Zebrafish Array)   Dr.12138.2.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000135521
swissprot - Q5IGR8
ZFIN ID - ZDB-GENE-050211-3
Ensembl - ENSDARG00000103155
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 EXT1ENSGALG00000039013Gallus gallus
 EXT1ENSG00000182197Homo sapiens
 Ext1ENSMUSG00000061731Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ext1b / exostosin glycosyltransferase 1b / EXT1* / Q16394* / exostosin glycosyltransferase 1*ENSDARG0000010101986
ext2 / exostosin glycosyltransferase 2 / P70428* / Q93063* / Mus musculus exostoses (multiple) 2 (Ext2), transcript variant 1, mRNA.*ENSDARG0000005664834
extl3 / exostosin-like glycosyltransferase 3 / O43909*ENSDARG0000002681128
ext1c / exostoses (multiple) 1c / EXTL1* / Q92935* / Q9JKV7* / Exostosin-like 1 * / exostosin like glycosyltransferase 1*ENSDARG0000003564924
extl2 / exostosin-like glycosyltransferase 2 / Q9ES89* / Q9UBQ6* / Exostosin-like 2 *ENSDARG0000006319112


Protein motifs (from Interpro)
Interpro ID Name
 IPR004263  Exostosin-like
 IPR015338  Exostosin , C-terminal
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0015012 heparan sulfate proteoglycan biosynthetic process ISS
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030176 integral component of endoplasmic reticulum membrane ISS
 molecular_functionGO:0015020 glucuronosyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0050508 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity ISS
 molecular_functionGO:0050509 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase activity ISS


Pathways (from Reactome)
Pathway description
HS-GAG biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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