ENSDARG00000103642


Danio rerio

Features
Gene ID: ENSDARG00000103642
  
Biological name :pglyrp6
  
Synonyms : peptidoglycan recognition protein 6 / pglyrp6
  
Possible biological names infered from orthology : N-acetylmuramoyl-L-alanine amidase / peptidoglycan recognition protein 2 / PGLYRP2 / Q8VCS0 / Q96PD5
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 13624815
Gene end: 13633331
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000136160
NCBI entrez gene - 571817     See in Manteia.
RefSeq - NM_001045222
RefSeq Peptide - NP_001038687
swissprot - A0A0R4IJX9
ZFIN ID - ZDB-GENE-071227-2
Ensembl - ENSDARG00000103642
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q96PD5ENSG00000161031Homo sapiens
 Q8VCS0ENSMUSG00000079563Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pglyrp2 / peptidoglycan recognition protein 2 / Q8VCS0* / Q96PD5* / N-acetylmuramoyl-L-alanine amidase *ENSDARG0000006299836
pglyrp5 / peptidoglycan recognition protein 5 / Q96LB9* / O75594* / O88593* / Q0VB07* / Q96LB8* / A1A547* / PGLYRP3* / PGLYRP4* / PGLYRP1* / peptidoglycan recognition protein 1* / peptidogl...ENSDARG0000006838211


Protein motifs (from Interpro)
Interpro ID Name
 IPR002502  N-acetylmuramoyl-L-alanine amidase domain
 IPR006619  Peptidoglycan recognition protein family domain, metazoa/bacteria
 IPR015510  Peptidoglycan recognition protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009253 peptidoglycan catabolic process IEA
 biological_processGO:0042742 defense response to bacterium IMP
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0008745 N-acetylmuramoyl-L-alanine amidase activity IDA


Pathways (from Reactome)
Pathway description
Antimicrobial peptides


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000103642 pglyrp6 / peptidoglycan recognition protein 6 / Q96PD5* / Q8VCS0* / PGLYRP2* / peptidoglycan recognition protein 2* / N-acetylmuramoyl-L-alanine amidase *  / complex






 

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