ENSDARG00000104207


Danio rerio

Features
Gene ID: ENSDARG00000104207
  
Biological name :pcyt1bb
  
Synonyms : pcyt1bb / phosphate cytidylyltransferase 1, choline, beta b
  
Possible biological names infered from orthology : Choline-phosphate cytidylyltransferase B / PCYT1B / phosphate cytidylyltransferase 1, choline, beta / Q811Q9 / Q9Y5K3
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 40618615
Gene end: 40630650
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000136437
NCBI entrez gene - 555725     See in Manteia.
RefSeq - NM_001037374
RefSeq - XM_005157481
RefSeq Peptide - NP_001032451
swissprot - A0A0R4IKK6
ZFIN ID - ZDB-GENE-051120-48
Ensembl - ENSDARG00000104207
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PCYT1BENSGALG00000016318Gallus gallus
 PCYT1BENSG00000102230Homo sapiens
 Pcyt1bENSMUSG00000035246Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pcyt1ba / phosphate cytidylyltransferase 1, choline, beta a / Q811Q9* / PCYT1B* / Q9Y5K3* / Choline-phosphate cytidylyltransferase B * / phosphate cytidylyltransferase 1, choline, beta*ENSDARG0000005816270
pcyt1aa / pcyt1ab / phosphate cytidylyltransferase 1, choline, alpha a / PCYT1A* / P49585* / P49586* / Choline-phosphate cytidylyltransferase A * / phosphate cytidylyltransferase 1, choline, alpha*ENSDARG0000001123364
pcyt1ab / phosphate cytidylyltransferase 1, choline, alpha b / P49585* / PCYT1A* / phosphate cytidylyltransferase 1, choline, alpha*ENSDARG0000000449261


Protein motifs (from Interpro)
Interpro ID Name
 IPR004821  Cytidyltransferase-like domain
 IPR014729  Rossmann-like alpha/beta/alpha sandwich fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009058 biosynthetic process IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003824 catalytic activity IEA


Pathways (from Reactome)
Pathway description
Synthesis of PC


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000058162 pcyt1ba / phosphate cytidylyltransferase 1, choline, beta a / Q811Q9* / PCYT1B* / Q9Y5K3* / Choline-phosphate cytidylyltransferase B * / phosphate cytidylyltransferase 1, choline, beta*  / complex
 ENSDARG00000104207 pcyt1bb / phosphate cytidylyltransferase 1, choline, beta b / Q811Q9* / PCYT1B* / Q9Y5K3* / Choline-phosphate cytidylyltransferase B * / phosphate cytidylyltransferase 1, choline, beta*  / complex






 

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