ENSDARG00000106873


Danio rerio

Features
Gene ID: ENSDARG00000106873
  
Biological name :LO018188.1
  
Synonyms : LO018188.1
  
Possible biological names infered from orthology : Q8CC35 / Q8N3V7 / synaptopodin / SYNPO
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 49604362
Gene end: 49665640
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000156813
NCBI entrez gene - 100536545     See in Manteia.
Ensembl - ENSDARG00000106873
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SYNPOENSGALG00000027330Gallus gallus
 SYNPOENSG00000171992Homo sapiens
 SynpoENSMUSG00000043079Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
synpo2lb / synaptopodin 2-like b / Q8BWB1* / Q9H987* / SYNPO2L* / synaptopodin 2 like*ENSDARG0000007869616
synpo2la / synaptopodin 2-like a / Q8BWB1* / Q9H987* / SYNPO2L* / synaptopodin 2 like*ENSDARG0000007729314
synpo2b / synaptopodin 2b / Q91YE8* / Q9UMS6* / SYNPO2* / synaptopodin 2*ENSDARG0000007715713


Protein motifs (from Interpro)
Interpro ID Name
 IPR028753  Synaptopodin


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr