ENSGALG00000027330


Gallus gallus

Features
Gene ID: ENSGALG00000027330
  
Biological name :SYNPO
  
Synonyms : synaptopodin / SYNPO
  
Possible biological names infered from orthology : Q8CC35 / Q8N3V7
  
Species: Gallus gallus
  
Chr. number: 13
Strand: -1
Band:
Gene start: 13093269
Gene end: 13097891
  
Corresponding Affymetrix probe sets: Gga.17698.1.S1_at (Chicken Array)   Gga.18265.1.A1_at (Chicken Array)   Gga.18265.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000041810
NCBI entrez gene - 770421     See in Manteia.
RefSeq - XM_015293921
swissprot - R4GI80
Ensembl - ENSGALG00000027330
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LO018188.1ENSDARG00000106873Danio rerio
 SYNPOENSG00000171992Homo sapiens
 SynpoENSMUSG00000043079Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SYNPO2 / synaptopodin 2 / Q91YE8* / Q9UMS6*ENSGALG0000001199417
SYNPO2L / synaptopodin 2 like / Q8BWB1* / Q9H987*ENSGALG0000000520713


Protein motifs (from Interpro)
Interpro ID Name
 IPR028753  Synaptopodin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008542 visual learning IEA
 biological_processGO:0032233 positive regulation of actin filament bundle assembly IEA
 biological_processGO:0048169 regulation of long-term neuronal synaptic plasticity IEA
 biological_processGO:1905355 spine apparatus assembly IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0015629 actin cytoskeleton IEA
 cellular_componentGO:0030018 Z disc IBA
 cellular_componentGO:0097444 spine apparatus IEA
 molecular_functionGO:0003779 actin binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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