ENSDARG00000111785


Danio rerio

Features
Gene ID: ENSDARG00000111785
  
Biological name :trappc2l
  
Synonyms : trafficking protein particle complex 2-like / trappc2l
  
Possible biological names infered from orthology : Q9JME7 / Q9UL33 / Trafficking protein particle complex subunit 2-like protein
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 55633483
Gene end: 55637368
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000153917
Ensembl peptide - ENSDARP00000146081
NCBI entrez gene - 445112     See in Manteia.
RefSeq - NM_001003506
RefSeq Peptide - NP_001003506
swissprot - A0A0R4IY03
swissprot - Q6DG96
ZFIN ID - ZDB-GENE-040801-249
Ensembl - ENSDARG00000111785
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRAPPC2LENSGALG00000006250Gallus gallus
 Q9UL33ENSG00000167515Homo sapiens
 Q9JME7ENSMUSG00000015013Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006722  Trafficking protein particle complex subunit 2
 IPR011012  Longin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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