ENSMUSG00000015013


Mus musculus
complextransportTrappc2lproteingolgiintracellularcytoplasmtraffickingparticlesubunitlongin-likedomainsuperfamilyeroligomerizationendoplasmicreticulumapparatuscytosoltrappmembrane-boundedorganelleperinuclearregioncopii-mediatedvesiclerabgefsexchangegtp

Features
Gene ID: ENSMUSG00000015013
  
Biological name :Trappc2l
  
Synonyms : Q9JME7 / Trafficking protein particle complex subunit 2-like protein / Trappc2l
  
Possible biological names infered from orthology : Q9UL33 / trafficking protein particle complex 2 like
  
Species: Mus musculus
  
Chr. number: 8
Strand: 1
Band: E1
Gene start: 122611640
Gene end: 122616660
  
Corresponding Affymetrix probe sets: 10576152 (MoGene1.0st)   1417105_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000015157
NCBI entrez gene - 59005     See in Manteia.
MGI - MGI:1916295
RefSeq - NM_021502
RefSeq Peptide - NP_067477
swissprot - Q9JME7
Ensembl - ENSMUSG00000015013
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trappc2lENSDARG00000111785Danio rerio
 TRAPPC2LENSGALG00000006250Gallus gallus
 Q9UL33ENSG00000167515Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006722  Trafficking protein particle complex subunit 2
 IPR011012  Longin-like domain superfamily


Gene Ontology (GO)
establishment of localizationcellular localizationcellular component organizationcellular component biogenesisestablishment of localizationcellular localizationcellular component organizationcellular component biogenesisestablishment of localizationcellular localizationcellular component organizationcellular component biogenesisestablishment of localizationcellular localizationcellular component organizationcellular component biogenesisestablishment of localizationcellular localizationcellular component organizationcellular component biogenesisestablishment of localizationcellular localizationcellular component organizationcellular component biogenesisestablishment of localizationcellular localizationcellular component organizationcellular component biogenesisestablishment of localizationcellular localizationcellular component organizationcellular component biogenesisestablishment of localizationcellular localizationcellular component organizationcellular component biogenesisestablishment of localizationcellular localizationcellular component organizationcellular component biogenesisestablishment of localizationestablishment of localizationcellular localizationcellular localizationcellular component organizationcellular component organizationcellular component biogenesiscellular component biogenesis
cellorganelleprotein-containing complexcellorganelleprotein-containing complexcellorganelleprotein-containing complexcellorganelleprotein-containing complexcellorganelleprotein-containing complexcellorganelleprotein-containing complexcellorganelleprotein-containing complexcellorganelleprotein-containing complexcellorganelleprotein-containing complexcellorganelleprotein-containing complexcellcellorganelleorganelleprotein-containing complexprotein-containing complex
TypeGO IDTermEv.Code
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0051259 protein complex oligomerization ISO
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0030008 TRAPP complex ISO
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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